BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031481
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    75   6e-12
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    74   1e-11
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    74   2e-11
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             72   4e-11
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...    65   4e-09

>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/96 (37%), Positives = 58/96 (60%)
 Frame = -2

Query: 289  LTHLMFADNIFLFCNANKRTLRNLMGILDRYQSTYGQKISKAKCKNFLSKMHHHRKEDIK 110
            LT+L FAD++ LFC  + +++  +M  + ++  + G K++ AKC+ F   M    KE+++
Sbjct: 1007 LTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLR 1066

Query: 109  EMLGIKEGGLPEKYLGVPLFQGRITKDYMTPLIEKI 2
             +    EG LP +YLGVPL   R+T     PLI+KI
Sbjct: 1067 RITDFAEGKLPVRYLGVPLSCKRLTIQQYMPLIDKI 1102


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/96 (36%), Positives = 58/96 (60%)
 Frame = -2

Query: 289  LTHLMFADNIFLFCNANKRTLRNLMGILDRYQSTYGQKISKAKCKNFLSKMHHHRKEDIK 110
            LT+L FAD++ LFC  + +++  +M  + ++  + G K++ AKC+ F   M    KE+++
Sbjct: 890  LTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLR 949

Query: 109  EMLGIKEGGLPEKYLGVPLFQGRITKDYMTPLIEKI 2
             +    EG LP +YLG+PL   R+T     PLI+KI
Sbjct: 950  RITDFAEGKLPVRYLGMPLSCKRLTIQQYMPLIDKI 985


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/82 (40%), Positives = 49/82 (59%)
 Frame = -2

Query: 286 THLMFADNIFLFCNANKRTLRNLMGILDRYQSTYGQKISKAKCKNFLSKMHHHRKEDIKE 107
           TH+++AD++ +FC   KR +R L+ I  +Y    GQ I+ AK + F S M   R + I  
Sbjct: 689 THILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNAKSRFFTSAMTGSRVQMISS 748

Query: 106 MLGIKEGGLPEKYLGVPLFQGR 41
           +LG   G LP  YLG P+F+G+
Sbjct: 749 LLGFNVGSLPFTYLGCPIFRGK 770


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/103 (33%), Positives = 61/103 (59%)
 Frame = -2

Query: 310 SNSTHTSLTHLMFADNIFLFCNANKRTLRNLMGILDRYQSTYGQKISKAKCKNFLSKMHH 131
           S   +  LTHL+FAD++ +F  A++++++ +   L+ +    G +++  KC+ FL  +  
Sbjct: 55  SKCANPLLTHLIFADDLVIFSKASRQSMQAVQNCLNWFGRNSGLEVNTGKCEMFLGGLTD 114

Query: 130 HRKEDIKEMLGIKEGGLPEKYLGVPLFQGRITKDYMTPLIEKI 2
             K+++   +GI  G  P KYLG+P+   R+TK    PL+EKI
Sbjct: 115 SEKQELSSCMGITLGNFPMKYLGLPVNTHRLTKADYEPLLEKI 157


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
 Frame = -2

Query: 289 LTHLMFADNIFLFCNANKRTLRNLMGILDRYQSTYGQKISKAKCKNFLSKM-HHHRKEDI 113
           ++HL+FAD+  LF  A+      +  +L  Y+S+ GQ I+ +KC    S       +EDI
Sbjct: 541 ISHLLFADDSLLFFKADTEQASRIRDVLQMYESSTGQLINPSKCSMLFSDFCPQQHQEDI 600

Query: 112 KEMLGIKEGGLPEKYLGVPLFQGRITKDYMTPLIEKI 2
           K +LG+      EKYLG+P  +GR+      P+ +++
Sbjct: 601 KRILGVTNSSFEEKYLGLPTPEGRMKAGQFQPIKDRL 637