BLASTX nr result

ID: Coptis24_contig00031457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031457
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255...   271   9e-71
ref|XP_004155251.1| PREDICTED: uncharacterized LOC101204824 [Cuc...   245   9e-63
ref|XP_004134298.1| PREDICTED: uncharacterized protein LOC101204...   245   9e-63
ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|2...   244   1e-62
ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795...   236   4e-60

>ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255258 [Vitis vinifera]
          Length = 2572

 Score =  271 bits (694), Expect = 9e-71
 Identities = 139/274 (50%), Positives = 182/274 (66%), Gaps = 18/274 (6%)
 Frame = -2

Query: 773  YDMRGRCEWLIGYGPSMSLTFWAIHCLDDISPLRFPRVTVWKTLSLAGAENRYLLSPGNL 594
            ++  G+CEWLIG+GP M LTFWAIHCLDD SP+RFPRVT+WK   + GAE     + GN 
Sbjct: 375  HEKAGKCEWLIGFGPGMFLTFWAIHCLDDFSPVRFPRVTLWKRQEVQGAEIGNFHNTGNS 434

Query: 593  NSEDQFLFIKAVISRSNLHGPPAKCSLFQLLPDNSMGWSQLHTLESSNTQ---------- 444
            NSEDQ +  K VI R+ L GPP  CSL QLLP NS+ WS L+T   + TQ          
Sbjct: 435  NSEDQSVLNKVVIMRNLLFGPPIACSLIQLLPCNSLCWSFLYTQAFNGTQDGSINKFTRE 494

Query: 443  -------GELLNLGGHTGNILQVAVHPYGSEIELAVSLDSSGFLLFWSLSKVSSCIFGMP 285
                   G  LN+ GH+G ILQVAVHPY  ++ELA SLDS+G LL WSLS +S+CI G+ 
Sbjct: 495  NILSCCSGATLNIDGHSGKILQVAVHPYSCKVELAASLDSNGLLLLWSLSTISNCILGL- 553

Query: 284  AQVLPSWKLAGKLPTKHWSSVEFSCLSWAPSVLKDFSVLLLASAVGIDCIMIEIAENEGE 105
            + + P+WKL GK  T+  S  +++ L WAPSVL +  +LL+  A GID  +++++++E E
Sbjct: 554  STLNPTWKLCGKFATQD-SGSKYTSLHWAPSVLDEDCILLMGHAGGIDLFIVKVSQSEEE 612

Query: 104  KVVFHKLCTIPFTGHNHV-EGPTSIFVIPLPSTC 6
            KV+ +KLCTIPFT H    +GP ++F IPL S C
Sbjct: 613  KVICYKLCTIPFTKHGPCQDGPANVFSIPLLSAC 646


>ref|XP_004155251.1| PREDICTED: uncharacterized LOC101204824 [Cucumis sativus]
          Length = 2419

 Score =  245 bits (625), Expect = 9e-63
 Identities = 132/270 (48%), Positives = 168/270 (62%), Gaps = 18/270 (6%)
 Frame = -2

Query: 761  GRCEWLIGYGPSMSLTFWAIHCLDDISPLRFPRVTVWKTLSLAGAENRYLLSPGNLNSED 582
            G CEWLI  GP   +TFWA+HCLDD+SPLRFP+VT+WK   L G E     + G  N  +
Sbjct: 327  GNCEWLISLGPGSLVTFWAVHCLDDVSPLRFPQVTLWKKQELKGFEVGRHYTDGCTNLSN 386

Query: 581  QFLFIKAVISRSNLHGPPAKCSLFQLLPDNSMGWSQL--HTLE---------------SS 453
            +FL  K VISR +  G P+ CSL QLLP NS+ WS L  HTL                SS
Sbjct: 387  KFLLKKVVISRIHQSGSPSICSLIQLLPCNSLVWSLLSAHTLTDVGDASFDQKRLESLSS 446

Query: 452  NTQGELLNLGGHTGNILQVAVHPYGSEIELAVSLDSSGFLLFWSLSKVSSCIFGMPAQVL 273
             +    LNL GH G IL VAVHPY  E+++A SLDS+G LLFWSLS +S+C  G P  + 
Sbjct: 447  CSFSSQLNLSGHAGKILHVAVHPYNCEVKIAASLDSNGLLLFWSLSSISNCALGSPT-LT 505

Query: 272  PSWKLAGKLPTKHWSSVEFSCLSWAPSVLKDFSVLLLASAVGIDCIMIEIAENEGEKVVF 93
            P+W+L GKL T+  S  +++ + WAPS+L +  +LL+  A GID   + I++++ E    
Sbjct: 506  PTWELCGKLVTQD-SCSKYTSVQWAPSILDEELILLMGHARGIDFFAVRISQSDEENTEC 564

Query: 92   HKLCTIPFTGHNHVE-GPTSIFVIPLPSTC 6
            H LCTIPFTGH   E GPT+IF I LPS C
Sbjct: 565  HYLCTIPFTGHGPFENGPTNIFSILLPSDC 594


>ref|XP_004134298.1| PREDICTED: uncharacterized protein LOC101204824 [Cucumis sativus]
          Length = 2491

 Score =  245 bits (625), Expect = 9e-63
 Identities = 132/270 (48%), Positives = 168/270 (62%), Gaps = 18/270 (6%)
 Frame = -2

Query: 761  GRCEWLIGYGPSMSLTFWAIHCLDDISPLRFPRVTVWKTLSLAGAENRYLLSPGNLNSED 582
            G CEWLI  GP   +TFWA+HCLDD+SPLRFP+VT+WK   L G E     + G  N  +
Sbjct: 355  GNCEWLISLGPGSLVTFWAVHCLDDVSPLRFPQVTLWKKQELKGFEVGRHYTDGCTNLSN 414

Query: 581  QFLFIKAVISRSNLHGPPAKCSLFQLLPDNSMGWSQL--HTLE---------------SS 453
            +FL  K VISR +  G P+ CSL QLLP NS+ WS L  HTL                SS
Sbjct: 415  KFLLKKVVISRIHQSGSPSICSLIQLLPCNSLVWSLLSAHTLTDVGDASFDQKRLESLSS 474

Query: 452  NTQGELLNLGGHTGNILQVAVHPYGSEIELAVSLDSSGFLLFWSLSKVSSCIFGMPAQVL 273
             +    LNL GH G IL VAVHPY  E+++A SLDS+G LLFWSLS +S+C  G P  + 
Sbjct: 475  CSFSSQLNLSGHAGKILHVAVHPYNCEVKIAASLDSNGLLLFWSLSSISNCALGSPT-LT 533

Query: 272  PSWKLAGKLPTKHWSSVEFSCLSWAPSVLKDFSVLLLASAVGIDCIMIEIAENEGEKVVF 93
            P+W+L GKL T+  S  +++ + WAPS+L +  +LL+  A GID   + I++++ E    
Sbjct: 534  PTWELCGKLVTQD-SCSKYTSVQWAPSILDEELILLMGHARGIDFFAVRISQSDEENTEC 592

Query: 92   HKLCTIPFTGHNHVE-GPTSIFVIPLPSTC 6
            H LCTIPFTGH   E GPT+IF I LPS C
Sbjct: 593  HYLCTIPFTGHGPFENGPTNIFSILLPSDC 622


>ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|222844366|gb|EEE81913.1|
            predicted protein [Populus trichocarpa]
          Length = 2434

 Score =  244 bits (623), Expect = 1e-62
 Identities = 134/274 (48%), Positives = 174/274 (63%), Gaps = 18/274 (6%)
 Frame = -2

Query: 773  YDMRGRCEWLIGYGPSMSLTFWAIHCLDDISPLRFPRVTVWKTLSLAGAENRYLLSPGNL 594
            +D  GRCEWLIG+GP   +TFWAIHCLDDISP+RFPRVT+WKT  L   E  +L   G  
Sbjct: 354  HDRVGRCEWLIGFGPGRGITFWAIHCLDDISPIRFPRVTLWKTQELEDLEAGHLHGAGFA 413

Query: 593  NSEDQFLFIKAVISRSNLHGPPAKCSLFQLLPDNSMGWSQLHT----------------- 465
            N     L  K V+ R+ L GPP  CSL  L P N +  S L++                 
Sbjct: 414  NFNAWLLLDKVVVLRNCLSGPPNICSLMHLSPCNFLVRSLLYSQIPSDIEDASFNKSKID 473

Query: 464  LESSNTQGELLNLGGHTGNILQVAVHPYGSEIELAVSLDSSGFLLFWSLSKVSSCIFGMP 285
              SS + G +LN GGHTG ILQVA+HP+  E+ELAVSLDS G LLFW +S +S+C  G P
Sbjct: 474  KYSSCSSGGVLN-GGHTGKILQVAMHPHIYEVELAVSLDSDGLLLFWIVSTISNCSLG-P 531

Query: 284  AQVLPSWKLAGKLPTKHWSSVEFSCLSWAPSVLKDFSVLLLASAVGIDCIMIEIAENEGE 105
            A+++P WKL+GKL T + S  +++ L WAPS L +  VLL+  A GIDC +++I++   E
Sbjct: 532  AKLIPGWKLSGKLAT-YDSCSKYTSLRWAPSTLGEDHVLLVGHAGGIDCFIVKISQICKE 590

Query: 104  KVVFHKLCTIPFTGHNHVE-GPTSIFVIPLPSTC 6
             ++ H + TIP TGH   E GPT+IF +PLPS+C
Sbjct: 591  GIICHYIGTIPLTGHGPFEDGPTNIFAVPLPSSC 624


>ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795225 [Glycine max]
          Length = 2369

 Score =  236 bits (602), Expect = 4e-60
 Identities = 126/277 (45%), Positives = 176/277 (63%), Gaps = 21/277 (7%)
 Frame = -2

Query: 773  YDMRGRCEWLIGYGPSMSLTFWAIHCLDDISPLRFPRVTVWKTLSLAGAENRYLLSPGNL 594
            +D+R  C+WL+G+GP M L+FWA+ CLDD+SPLRFPRVT+W    +   +N  + +    
Sbjct: 347  HDVRN-CDWLVGFGPGMLLSFWAVQCLDDVSPLRFPRVTLWNKHEI---QNHDIANVYKF 402

Query: 593  NSED---QFLFIKAVISRSNLHGPPAKCSLFQLLPDNSMGWSQLH----------TLESS 453
            NS D    F   K +I RS+L GPP  CS  QLLP NS+ WS             ++++ 
Sbjct: 403  NSSDFKNAFFLHKIIILRSSLSGPPIICSSLQLLPCNSLVWSNFRIQMIHDAVEKSIDNV 462

Query: 452  NTQ-------GELLNLGGHTGNILQVAVHPYGSEIELAVSLDSSGFLLFWSLSKVSSCIF 294
            NT        G +LNL GH+G IL+V++HP  S+++LAVSLDS+G LLFWSLS +S+CI 
Sbjct: 463  NTDNISSHLTGGVLNLDGHSGRILKVSLHPCTSKVQLAVSLDSNGLLLFWSLSNISNCIL 522

Query: 293  GMPAQVLPSWKLAGKLPTKHWSSVEFSCLSWAPSVLKDFSVLLLASAVGIDCIMIEIAEN 114
            G P  ++P+ +L GKL T+   S+ ++ L+WAPS+L D  V  +    GIDC ++ I ++
Sbjct: 523  GCPT-LVPTMELYGKLATQDSCSL-YTSLTWAPSILDDKLVFFMGHTRGIDCFIVNICQS 580

Query: 113  EGEKVVFHKLCTIPFTGHN-HVEGPTSIFVIPLPSTC 6
            E E +  H LCTIPF+GH  + +GP  IF IPL STC
Sbjct: 581  EEENIECHYLCTIPFSGHGPYEDGPFDIFTIPLNSTC 617


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