BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031447
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]   270   1e-70
ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding prote...   267   8e-70
emb|CBI21312.3| unnamed protein product [Vitis vinifera]              267   8e-70
ref|XP_002298650.1| predicted protein [Populus trichocarpa] gi|2...   266   1e-69
ref|XP_002512890.1| double-stranded RNA binding protein, putativ...   266   2e-69

>emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]
          Length = 552

 Score =  270 bits (690), Expect = 1e-70
 Identities = 133/154 (86%), Positives = 142/154 (92%)
 Frame = -1

Query: 462 SGFVGMYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEVFEGPSYCTTLRQ 283
           +G V M+KNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGE+FE PSYCTTLRQ
Sbjct: 67  TGEVDMFKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEIFESPSYCTTLRQ 126

Query: 282 AEHAAAEVALSSLSTRGPSRLLAARVLDEIGVYKNLLQETAHRAGLDLPVYITERSGPGH 103
           AEHAAAEVAL+ LSTRGPSR L ARVLDE GVYKNLLQETAHRAGL+LPVY T RSGPGH
Sbjct: 127 AEHAAAEVALNVLSTRGPSRSLTARVLDETGVYKNLLQETAHRAGLNLPVYTTVRSGPGH 186

Query: 102 LPVFTSIVELAGLNFTGEPARTKKQAEKNAAMAA 1
           +PVFT  VELAG+NFTGE A+TKKQAEKNAA+AA
Sbjct: 187 VPVFTCTVELAGMNFTGESAKTKKQAEKNAAIAA 220


>ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding protein 5 [Vitis vinifera]
          Length = 484

 Score =  267 bits (683), Expect = 8e-70
 Identities = 131/149 (87%), Positives = 139/149 (93%)
 Frame = -1

Query: 447 MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEVFEGPSYCTTLRQAEHAA 268
           M+KNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGE+FE PSYCTTLRQAEHAA
Sbjct: 4   MFKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEIFESPSYCTTLRQAEHAA 63

Query: 267 AEVALSSLSTRGPSRLLAARVLDEIGVYKNLLQETAHRAGLDLPVYITERSGPGHLPVFT 88
           AEVAL+ LSTRGPSR L ARVLDE GVYKNLLQETAHRAGL+LPVY T RSGPGH+PVFT
Sbjct: 64  AEVALNVLSTRGPSRSLTARVLDETGVYKNLLQETAHRAGLNLPVYTTVRSGPGHVPVFT 123

Query: 87  SIVELAGLNFTGEPARTKKQAEKNAAMAA 1
             VELAG+NFTGE A+TKKQAEKNAA+AA
Sbjct: 124 CTVELAGMNFTGESAKTKKQAEKNAAIAA 152



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/69 (47%), Positives = 39/69 (56%)
 Frame = -1

Query: 450 GMYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEVFEGPSYCTTLRQAEHA 271
           G+YKN LQE A R+  NLP Y  +R GP H P F  +V   G  F G S   T +QAE  
Sbjct: 89  GVYKNLLQETAHRAGLNLPVYTTVRSGPGHVPVFTCTVELAGMNFTGES-AKTKKQAEKN 147

Query: 270 AAEVALSSL 244
           AA  A S+L
Sbjct: 148 AAIAAWSAL 156


>emb|CBI21312.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  267 bits (683), Expect = 8e-70
 Identities = 131/149 (87%), Positives = 139/149 (93%)
 Frame = -1

Query: 447 MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEVFEGPSYCTTLRQAEHAA 268
           M+KNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGE+FE PSYCTTLRQAEHAA
Sbjct: 1   MFKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEIFESPSYCTTLRQAEHAA 60

Query: 267 AEVALSSLSTRGPSRLLAARVLDEIGVYKNLLQETAHRAGLDLPVYITERSGPGHLPVFT 88
           AEVAL+ LSTRGPSR L ARVLDE GVYKNLLQETAHRAGL+LPVY T RSGPGH+PVFT
Sbjct: 61  AEVALNVLSTRGPSRSLTARVLDETGVYKNLLQETAHRAGLNLPVYTTVRSGPGHVPVFT 120

Query: 87  SIVELAGLNFTGEPARTKKQAEKNAAMAA 1
             VELAG+NFTGE A+TKKQAEKNAA+AA
Sbjct: 121 CTVELAGMNFTGESAKTKKQAEKNAAIAA 149



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/69 (47%), Positives = 39/69 (56%)
 Frame = -1

Query: 450 GMYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEVFEGPSYCTTLRQAEHA 271
           G+YKN LQE A R+  NLP Y  +R GP H P F  +V   G  F G S   T +QAE  
Sbjct: 86  GVYKNLLQETAHRAGLNLPVYTTVRSGPGHVPVFTCTVELAGMNFTGES-AKTKKQAEKN 144

Query: 270 AAEVALSSL 244
           AA  A S+L
Sbjct: 145 AAIAAWSAL 153


>ref|XP_002298650.1| predicted protein [Populus trichocarpa] gi|222845908|gb|EEE83455.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  266 bits (681), Expect = 1e-69
 Identities = 129/149 (86%), Positives = 139/149 (93%)
 Frame = -1

Query: 447 MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEVFEGPSYCTTLRQAEHAA 268
           M+KNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGE+FE PSYCTTLRQAEHAA
Sbjct: 1   MFKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEIFESPSYCTTLRQAEHAA 60

Query: 267 AEVALSSLSTRGPSRLLAARVLDEIGVYKNLLQETAHRAGLDLPVYITERSGPGHLPVFT 88
           AEVAL+ LS RGP+R L ARVLDE G+YKNLLQETAHRAGL+LPVY T RSGPGH+PVFT
Sbjct: 61  AEVALNVLSLRGPARSLTARVLDETGIYKNLLQETAHRAGLNLPVYTTVRSGPGHVPVFT 120

Query: 87  SIVELAGLNFTGEPARTKKQAEKNAAMAA 1
             VELAG+NFTGEPA+TKKQAEKNAA+AA
Sbjct: 121 CTVELAGMNFTGEPAKTKKQAEKNAAIAA 149



 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 32/69 (46%), Positives = 38/69 (55%)
 Frame = -1

Query: 450 GMYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEVFEGPSYCTTLRQAEHA 271
           G+YKN LQE A R+  NLP Y  +R GP H P F  +V   G  F G     T +QAE  
Sbjct: 86  GIYKNLLQETAHRAGLNLPVYTTVRSGPGHVPVFTCTVELAGMNFTGEP-AKTKKQAEKN 144

Query: 270 AAEVALSSL 244
           AA  A S+L
Sbjct: 145 AAIAAWSAL 153


>ref|XP_002512890.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223547901|gb|EEF49393.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 477

 Score =  266 bits (680), Expect = 2e-69
 Identities = 128/149 (85%), Positives = 139/149 (93%)
 Frame = -1

Query: 447 MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEVFEGPSYCTTLRQAEHAA 268
           M+KNQLQELAQRSCFNLPSYAC+REGPDHAPRFKASVNFNGE+FE PSYCTTLRQAEHAA
Sbjct: 4   MFKNQLQELAQRSCFNLPSYACVREGPDHAPRFKASVNFNGEIFESPSYCTTLRQAEHAA 63

Query: 267 AEVALSSLSTRGPSRLLAARVLDEIGVYKNLLQETAHRAGLDLPVYITERSGPGHLPVFT 88
           AEVAL+ LS+RGPSR L ARVLDE G+YKNLLQETAHRAGL+LPVY T RSGPGH+P FT
Sbjct: 64  AEVALNVLSSRGPSRSLTARVLDETGIYKNLLQETAHRAGLNLPVYTTIRSGPGHVPTFT 123

Query: 87  SIVELAGLNFTGEPARTKKQAEKNAAMAA 1
             VELAG+NFTGEPA+TKKQAEKNAA+AA
Sbjct: 124 CTVELAGMNFTGEPAKTKKQAEKNAAIAA 152



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/75 (48%), Positives = 41/75 (54%)
 Frame = -1

Query: 450 GMYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEVFEGPSYCTTLRQAEHA 271
           G+YKN LQE A R+  NLP Y  IR GP H P F  +V   G  F G     T +QAE  
Sbjct: 89  GIYKNLLQETAHRAGLNLPVYTTIRSGPGHVPTFTCTVELAGMNFTGEP-AKTKKQAEKN 147

Query: 270 AAEVALSSLSTRGPS 226
           AA  A S+L  R PS
Sbjct: 148 AAIAAWSALK-RMPS 161