BLASTX nr result

ID: Coptis24_contig00031405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031405
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240899.1| uncharacterized protein LOC100818815 [Glycin...    81   1e-13
ref|NP_001242828.1| uncharacterized protein LOC100809454 [Glycin...    79   4e-13
ref|XP_002524229.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|XP_002282374.1| PREDICTED: uncharacterized protein At2g39795...    77   1e-12
ref|XP_002316261.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|NP_001240899.1| uncharacterized protein LOC100818815 [Glycine max]
           gi|255640060|gb|ACU20321.1| unknown [Glycine max]
          Length = 253

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 13/125 (10%)
 Frame = -3

Query: 340 RSLVVVGAIGCKKNYYYAPSYLSTLNHHHQHKK-------FATLPW------DETVVGIL 200
           R+L V G +    N  +   + + +N H QHK        F+++        DE ++ ++
Sbjct: 15  RALAVAGQLTKNSNLGHRSLHFTAINQH-QHKDSFVPRFHFSSVASKKKPTSDENLLRVI 73

Query: 199 KSEIQCTQDSTNPSRESNIPDGFPFKIEDSPGQQILVLTRQYQSETIKVQVMMPTLVTGG 20
           +SEI+C Q++ + +    +P  FPFKI DSPGQQ ++L R YQ E IKV+V MP LVTG 
Sbjct: 74  ESEIECAQETDDHNAAEEVPGNFPFKIIDSPGQQTIMLERTYQDEEIKVEVHMPDLVTGE 133

Query: 19  DDGVD 5
           ++  D
Sbjct: 134 ENDDD 138


>ref|NP_001242828.1| uncharacterized protein LOC100809454 [Glycine max]
           gi|255642291|gb|ACU21410.1| unknown [Glycine max]
          Length = 253

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 13/125 (10%)
 Frame = -3

Query: 340 RSLVVVGAIGCKKNYYYAPSYLSTLNHHHQHKK-------FATLPW------DETVVGIL 200
           R+L V G +  + N+    + LST    HQH+        F+++        DE ++ ++
Sbjct: 15  RALAVSGQL-TENNHLGHRTLLSTAISQHQHQDSLVPRFHFSSVASKKKPTSDENLLRLI 73

Query: 199 KSEIQCTQDSTNPSRESNIPDGFPFKIEDSPGQQILVLTRQYQSETIKVQVMMPTLVTGG 20
           +SEI+C Q++ + +    +P  FPFKI DSPGQQ + L R YQ E IKV+V MP LVTG 
Sbjct: 74  ESEIECAQETDDHNAAEEVPGNFPFKIIDSPGQQTITLERMYQDEEIKVEVHMPDLVTGE 133

Query: 19  DDGVD 5
           ++  D
Sbjct: 134 ENDDD 138


>ref|XP_002524229.1| conserved hypothetical protein [Ricinus communis]
           gi|223536506|gb|EEF38153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/72 (50%), Positives = 52/72 (72%)
 Frame = -3

Query: 220 ETVVGILKSEIQCTQDSTNPSRESNIPDGFPFKIEDSPGQQILVLTRQYQSETIKVQVMM 41
           E+++ ++ SEI+  Q++ +  R   IP GFPFKI D+PGQQ ++LTR+Y  E +KV+V M
Sbjct: 59  ESLLRVIDSEIKIAQETDDLDRVEAIPQGFPFKIVDNPGQQTIILTREYDGELVKVEVHM 118

Query: 40  PTLVTGGDDGVD 5
           P LVTG D+ VD
Sbjct: 119 PDLVTGEDNEVD 130


>ref|XP_002282374.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial [Vitis
           vinifera] gi|296086172|emb|CBI31613.3| unnamed protein
           product [Vitis vinifera]
          Length = 253

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -3

Query: 295 YYAPSYLSTLNHHHQHKKFATLPW-DETVVGILKSEIQCTQDSTNPSRESNIPDGFPFKI 119
           ++ PS     +  H +   A  P  D+ ++ +L+SEI+ +++S +       PDGFPF+I
Sbjct: 41  FHKPSLRPFASTLHFYSSSAKRPSSDDNLLRVLESEIKYSEESDDHDGNEEAPDGFPFEI 100

Query: 118 EDSPGQQILVLTRQYQSETIKVQVMMPTLVTG-GDD 14
           +D+PGQQ + L R+YQ E IKV+V MP LVTG GDD
Sbjct: 101 QDNPGQQTISLAREYQGEVIKVEVHMPDLVTGEGDD 136


>ref|XP_002316261.1| predicted protein [Populus trichocarpa] gi|222865301|gb|EEF02432.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/72 (44%), Positives = 52/72 (72%)
 Frame = -3

Query: 220 ETVVGILKSEIQCTQDSTNPSRESNIPDGFPFKIEDSPGQQILVLTRQYQSETIKVQVMM 41
           E+++ +++SEI+  Q++ +  R   IP  FPFKI+D+ GQQ ++LTR+Y+ E +KV+V M
Sbjct: 71  ESLLRVIESEIKDAQENDDNDRVEEIPKDFPFKIDDNAGQQTVILTREYEGELVKVEVHM 130

Query: 40  PTLVTGGDDGVD 5
           P  VTG ++ VD
Sbjct: 131 PDFVTGEENDVD 142


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