BLASTX nr result

ID: Coptis24_contig00031280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031280
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332086.1| predicted protein [Populus trichocarpa] gi|2...   161   3e-37
ref|XP_002515336.1| conserved hypothetical protein [Ricinus comm...   152   1e-34
ref|XP_002280562.1| PREDICTED: uncharacterized protein LOC100267...   149   1e-33
ref|XP_004138880.1| PREDICTED: uncharacterized protein LOC101213...   145   3e-32
ref|XP_004136450.1| PREDICTED: uncharacterized protein LOC101212...   142   1e-31

>ref|XP_002332086.1| predicted protein [Populus trichocarpa] gi|222874906|gb|EEF12037.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  161 bits (408), Expect = 3e-37
 Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
 Frame = +1

Query: 706  LEQQQSRINVTELKTQIVKKLGPDRSKRYFYFLNRLFSQKLSKGEFDKLCLRIIGRENLQ 885
            L  Q SR+++ EL+TQIVKK+G +RSK+YFY+LNR  SQKLSK EFDK C R++GRENL 
Sbjct: 2    LPHQSSRVDLVELRTQIVKKIGVERSKKYFYYLNRFLSQKLSKSEFDKSCFRLLGRENLP 61

Query: 886  LHNQLIRSILKNVCHAKVPPPIYE----KEALQKPTVTVGKKSPLTEDGHQQSGSLPTPT 1053
            LHN LIRSILKN C AK PPPIYE    K  LQ P       SP+ EDGH+QSGSL    
Sbjct: 62   LHNNLIRSILKNACQAKTPPPIYEAGPTKSLLQAP-----NSSPVREDGHEQSGSL---I 113

Query: 1054 PVQNSLIWSNGDVLPMS 1104
            P QN+ IWSNG VLP+S
Sbjct: 114  PNQNTPIWSNG-VLPVS 129


>ref|XP_002515336.1| conserved hypothetical protein [Ricinus communis]
            gi|223545280|gb|EEF46785.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 419

 Score =  152 bits (385), Expect = 1e-34
 Identities = 82/136 (60%), Positives = 96/136 (70%)
 Frame = +1

Query: 697  MQPLEQQQSRINVTELKTQIVKKLGPDRSKRYFYFLNRLFSQKLSKGEFDKLCLRIIGRE 876
            MQP  QQ SR ++ ELKTQIVKK+G +R ++YF++LNR  +QKLSK +FDK C R++GRE
Sbjct: 1    MQP--QQSSRTDLVELKTQIVKKVGVERFRKYFHYLNRFLNQKLSKSDFDKSCFRLLGRE 58

Query: 877  NLQLHNQLIRSILKNVCHAKVPPPIYEKEALQKPTVTVGKKSPLTEDGHQQSGSLPTPTP 1056
            NL LHNQLIRSILKN C AK PPP YE     K  + V K SP  EDGH+QSG    P  
Sbjct: 59   NLPLHNQLIRSILKNACQAKTPPPAYE-TGPTKSVIQVAKSSPGREDGHEQSGGSLLPNQ 117

Query: 1057 VQNSLIWSNGDVLPMS 1104
             QN  I SNG VLPMS
Sbjct: 118  NQNLPILSNG-VLPMS 132


>ref|XP_002280562.1| PREDICTED: uncharacterized protein LOC100267965 [Vitis vinifera]
          Length = 415

 Score =  149 bits (376), Expect = 1e-33
 Identities = 80/133 (60%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
 Frame = +1

Query: 697  MQPLEQQQSRINVTELKTQIVKKLGPDRSKRYFYFLNRLFSQKLSKGEFDKLCLRIIGRE 876
            MQP  QQ SRI+V +LK QIVKK+G DR++RYFY+LNRL SQKL K EFDKLC R++GRE
Sbjct: 1    MQP--QQSSRIDVADLKVQIVKKIGADRARRYFYYLNRLLSQKLCKSEFDKLCSRVLGRE 58

Query: 877  NLQLHNQLIRSILKNVCHAKVPPPIYEKEALQKPTVTVGKKSPLTEDGHQQSGS-LPTPT 1053
            N+ LHNQ IRSILKN  HAK PPP + K     P    G  + + EDGH+QS + +  PT
Sbjct: 59   NVLLHNQFIRSILKNAFHAKTPPPFHAK--TPPPFHDAGPTNSVEEDGHEQSRAVIANPT 116

Query: 1054 PVQNSLIWSNGDV 1092
            P  NS IWSNG V
Sbjct: 117  P--NSPIWSNGAV 127


>ref|XP_004138880.1| PREDICTED: uncharacterized protein LOC101213741 [Cucumis sativus]
            gi|449499602|ref|XP_004160861.1| PREDICTED:
            uncharacterized protein LOC101229002 [Cucumis sativus]
          Length = 407

 Score =  145 bits (365), Expect = 3e-32
 Identities = 79/130 (60%), Positives = 92/130 (70%)
 Frame = +1

Query: 697  MQPLEQQQSRINVTELKTQIVKKLGPDRSKRYFYFLNRLFSQKLSKGEFDKLCLRIIGRE 876
            MQP  QQ  RI++ ELK+QIVKKLG DRSKRYF++LNR  SQKLSK EFDK C R++GRE
Sbjct: 1    MQP--QQSLRIDLGELKSQIVKKLGADRSKRYFFYLNRFLSQKLSKNEFDKSCCRVLGRE 58

Query: 877  NLQLHNQLIRSILKNVCHAKVPPPIYEKEALQKPTVTVGKKSPLTEDGHQQSGSLPTPTP 1056
            NL LHNQLI+SILKN C AKV PPI       K +    K SPL EDG++  G++  PT 
Sbjct: 59   NLWLHNQLIQSILKNACQAKVAPPI-PVAGYPKTSTQSAKISPLVEDGNEDGGAV-FPTS 116

Query: 1057 VQNSLIWSNG 1086
             QN   WSNG
Sbjct: 117  TQNIPGWSNG 126


>ref|XP_004136450.1| PREDICTED: uncharacterized protein LOC101212293 [Cucumis sativus]
            gi|449505542|ref|XP_004162502.1| PREDICTED:
            uncharacterized LOC101212293 [Cucumis sativus]
          Length = 418

 Score =  142 bits (359), Expect = 1e-31
 Identities = 78/136 (57%), Positives = 95/136 (69%)
 Frame = +1

Query: 697  MQPLEQQQSRINVTELKTQIVKKLGPDRSKRYFYFLNRLFSQKLSKGEFDKLCLRIIGRE 876
            MQP  Q  SRI++ +LK QIVKKLG D+SKRYF+FL+R   QK+SK EFDK+C+R++GRE
Sbjct: 1    MQP--QHSSRIDLGDLKAQIVKKLGNDKSKRYFFFLSRFLGQKMSKVEFDKVCVRVLGRE 58

Query: 877  NLQLHNQLIRSILKNVCHAKVPPPIYEKEALQKPTVTVGKKSPLTEDGHQQSGSLPTPTP 1056
            N+QLHNQLIRSILKN C AK PPPI      Q   +     SP  EDG +Q+GS   P  
Sbjct: 59   NIQLHNQLIRSILKNACVAKTPPPINASGHAQS-VLQASNNSPCREDGPEQTGS-AFPNQ 116

Query: 1057 VQNSLIWSNGDVLPMS 1104
             Q+  IW NG VLP+S
Sbjct: 117  NQSKPIWPNG-VLPVS 131


Top