BLASTX nr result

ID: Coptis24_contig00031232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031232
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317571.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002317570.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002317569.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002333254.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
emb|CAN63229.1| hypothetical protein VITISV_022131 [Vitis vinifera]    65   8e-09

>ref|XP_002317571.1| predicted protein [Populus trichocarpa] gi|222860636|gb|EEE98183.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
 Frame = -1

Query: 240 MDPKLFIAVTSGKADLLEPL---NTDILQQVTPIKDTAIHIAAGFGHLETIKSIHSRCPI 70
           MD +L+    SG   +L  L   N  +L ++TP  +T +HIA  FGH   +  I++RC  
Sbjct: 1   MDSRLYRVAKSGNVYILLQLLNENPRLLTKLTPQGNTPLHIAVQFGHKGVVVEIYNRCRS 60

Query: 69  LFSRANSVGDTTLHVAARAGHF 4
           L +R NS GD+ LHVAAR GHF
Sbjct: 61  LLTRPNSSGDSPLHVAARCGHF 82


>ref|XP_002317570.1| predicted protein [Populus trichocarpa] gi|222860635|gb|EEE98182.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
 Frame = -1

Query: 240 MDPKLFIAVTSGKADLLEPL---NTDILQQVTPIKDTAIHIAAGFGHLETIKSIHSRCPI 70
           MD +L+    SG   +L  L   N  +L ++TP  +T +HIA  FGH   +  I++RC  
Sbjct: 1   MDSRLYRVAKSGNVYILLQLLNENPRLLTKLTPQGNTPLHIAVQFGHKGVVVEIYNRCRS 60

Query: 69  LFSRANSVGDTTLHVAARAGHF 4
           L +R NS GD+ LHVAAR GHF
Sbjct: 61  LLTRPNSSGDSPLHVAARCGHF 82


>ref|XP_002317569.1| predicted protein [Populus trichocarpa] gi|222860634|gb|EEE98181.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = -1

Query: 240 MDPKLFIAVTSGKADLLEPLNTD---ILQQVTPIKDTAIHIAAGFGHLETIKSIHSRCPI 70
           MD +L+  V SG   +L  L  +   +L ++TP  +T +HIA  FGH   +  I++RC  
Sbjct: 1   MDSRLYRVVKSGNVYILLQLLNEKPRLLTKLTPQGNTPLHIAVQFGHKGVVVEIYNRCRS 60

Query: 69  LFSRANSVGDTTLHVAARAGHF 4
           L +R NS GD+ LHVAAR GHF
Sbjct: 61  LLTRPNSSGDSPLHVAARCGHF 82


>ref|XP_002333254.1| predicted protein [Populus trichocarpa] gi|222835818|gb|EEE74253.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
 Frame = -1

Query: 240 MDPKLFIAVTSGKADLLEPL---NTDILQQVTPIKDTAIHIAAGFGHLETIKSIHSRCPI 70
           MD +L+    SG   +L  L   N  +L ++TP  +T +HIA  FGH   +  I++RC  
Sbjct: 1   MDSRLYRVAKSGNVYILLQLLNENPRLLTKLTPQGNTPLHIAVQFGHKGVVVEIYNRCGS 60

Query: 69  LFSRANSVGDTTLHVAARAGHF 4
           L +R NS GD+ LHVAAR GHF
Sbjct: 61  LLTRPNSSGDSPLHVAARCGHF 82


>emb|CAN63229.1| hypothetical protein VITISV_022131 [Vitis vinifera]
          Length = 1307

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
 Frame = -1

Query: 240  MDPKLFIAVTSGKAD----LLEPLNTD-------ILQQVTPIKDTAIHIAAGFGHLETIK 94
            MD ++++  T G+ D    +LE ++++       IL QV+P  +T +HIA  FGH E  +
Sbjct: 872  MDSRMYMQATRGRVDEFIQILESISSEKELXSSEILSQVSPRNNTCLHIAVRFGHHEXAE 931

Query: 93   SIHSRCPILFSRANSVGDTTLHVAAR 16
             I   CP L  + NS GDT LH+AAR
Sbjct: 932  YIVKECPDLIKKTNSTGDTALHIAAR 957



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/97 (42%), Positives = 50/97 (51%), Gaps = 16/97 (16%)
 Frame = -1

Query: 249 ASSMDPKLFIAVTSGKADLLE----------------PLNTDILQQVTPIKDTAIHIAAG 118
           ASSMDP L+ A   G  D+LE                P  + I  QVTP K+T +H+A  
Sbjct: 384 ASSMDPDLYRATIQG--DILEFIKAVEQGPDNRHAGVPAASCI--QVTPQKNTVLHLATI 439

Query: 117 FGHLETIKSIHSRCPILFSRANSVGDTTLHVAARAGH 7
           FGH E +K I    P L    N  GDT LH+AARAG+
Sbjct: 440 FGHDEIVKLICKDLPFLVMXRNCRGDTALHIAARAGN 476


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