BLASTX nr result

ID: Coptis24_contig00031208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031208
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302818.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002302818.1| predicted protein [Populus trichocarpa] gi|222844544|gb|EEE82091.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
 Frame = +1

Query: 130 LKYVVDVSSFLLVESSADSEEDLDPNVSMDYYNNIIVLADED--DAISCSCESCSLAXXX 303
           +K  VDVSSFLLVE++ DSE D DPN++      II L D+D  DA SCSC++       
Sbjct: 4   MKKSVDVSSFLLVEATGDSEVDSDPNMT------IIDLVDDDDGDAESCSCDT------- 50

Query: 304 XXXXXXXXXYSEEDDEHT-------YEDNHSYNHHDDAESCTTRMEMKLLDHVWDVMLTE 462
                    YSE ++ H         +  H     ++ E      + +   HV+   +  
Sbjct: 51  SYHSCVNGVYSEVEEYHVNYNVVDEEQHQHQQQQQEEEEEEEEEQQQEKGVHVYQSRVDH 110

Query: 463 ------TKKPMEFEVNVSEAVPSEEERNRLFWD 543
                  K+     V+ +    +E+E N+LFW+
Sbjct: 111 GHAGLPVKQKSCVSVDSANESMNEKEENKLFWE 143


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