BLASTX nr result
ID: Coptis24_contig00031178
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00031178
(331 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi... 159 2e-37
ref|XP_002332376.1| predicted protein [Populus trichocarpa] gi|2... 150 1e-34
emb|CBI28140.3| unnamed protein product [Vitis vinifera] 124 6e-27
ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selag... 100 1e-19
ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Sela... 100 2e-19
>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 159 bits (402), Expect = 2e-37
Identities = 74/110 (67%), Positives = 89/110 (80%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
KQLHCH K G + D+YIQNTLM MYSNCG LVSA +FDKMV K+VVSWATMIGAYAQW
Sbjct: 157 KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQW 216
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACAKVRNLEMVQWIHKYMEE 331
EA++LF+RME SVKPNE+ L+NVLTACA+ R+LE + +HKY++E
Sbjct: 217 DLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDE 266
Score = 75.5 bits (184), Expect = 4e-12
Identities = 36/110 (32%), Positives = 61/110 (55%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
KQ+H + + G+ + + + LM +Y CG A LF+KM EK + W MI + +
Sbjct: 258 KQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVED 317
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACAKVRNLEMVQWIHKYMEE 331
EA+ LF M+ VK ++V + ++L AC + LE+ +W+H Y+E+
Sbjct: 318 SDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK 367
Score = 71.2 bits (173), Expect = 8e-11
Identities = 34/93 (36%), Positives = 53/93 (56%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
K LH + K + +D + L+ MY+ CGS+ SA +F +M EK V++W +I A
Sbjct: 359 KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMC 418
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACA 280
G +A+ELF M+ VKP+ + + VL AC+
Sbjct: 419 GQGLKALELFHEMQMSEVKPDAITFVGVLAACS 451
>ref|XP_002332376.1| predicted protein [Populus trichocarpa] gi|222832200|gb|EEE70677.1|
predicted protein [Populus trichocarpa]
Length = 660
Score = 150 bits (378), Expect = 1e-34
Identities = 72/111 (64%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
KQ+HCH K G + D+Y QNTLM MYSNCG LVSA +FDKM +KTVVSWATMIG +AQW
Sbjct: 105 KQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQW 164
Query: 182 GSASEAVELFQR-MEYESVKPNEVILINVLTACAKVRNLEMVQWIHKYMEE 331
+EAV LF R M+ E+VKPNEV L+NVLTACA+ R+L MV+ IH+Y++E
Sbjct: 165 DQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDE 215
Score = 72.0 bits (175), Expect = 5e-11
Identities = 34/110 (30%), Positives = 62/110 (56%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
K++H + + G + LM +Y CG + A LFDK EK + SW MI + +
Sbjct: 207 KRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVED 266
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACAKVRNLEMVQWIHKYMEE 331
+ EA+ LF+ M+ + +K ++V + ++L AC + LE+ +W+H Y+++
Sbjct: 267 SNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKK 316
Score = 67.8 bits (164), Expect = 9e-10
Identities = 32/93 (34%), Positives = 52/93 (55%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
K LH + K + +D + L+ MY+ CGS+ +A +F +M EK V++W +I A
Sbjct: 308 KWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMC 367
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACA 280
G A A++ F M + VKP+ + + VL AC+
Sbjct: 368 GQAENALQYFDEMHIKGVKPDAITFVGVLAACS 400
>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 124 bits (312), Expect = 6e-27
Identities = 66/142 (46%), Positives = 84/142 (59%), Gaps = 32/142 (22%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
KQLHCH K G + D+YIQNTLM MYSNCG LVSA +FDKMV K+VVSWATMIGAYAQW
Sbjct: 95 KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQW 154
Query: 182 GSASEAVELFQRMEYES--------------------------------VKPNEVILINV 265
EA++LF+RME S VK ++V + ++
Sbjct: 155 DLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASL 214
Query: 266 LTACAKVRNLEMVQWIHKYMEE 331
L AC + LE+ +W+H Y+E+
Sbjct: 215 LIACTHLGALELGKWLHVYIEK 236
Score = 71.2 bits (173), Expect = 8e-11
Identities = 34/93 (36%), Positives = 53/93 (56%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
K LH + K + +D + L+ MY+ CGS+ SA +F +M EK V++W +I A
Sbjct: 228 KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMC 287
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACA 280
G +A+ELF M+ VKP+ + + VL AC+
Sbjct: 288 GQGLKALELFHEMQMSEVKPDAITFVGVLAACS 320
>ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein
SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 100 bits (249), Expect = 1e-19
Identities = 48/110 (43%), Positives = 72/110 (65%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
+++ V G + DS +QN L+ MYS CGSL SA +FD++ + V++W TMI YA+
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACAKVRNLEMVQWIHKYMEE 331
G+A++A+ELFQRM KPN V I +LTAC + +LE + IH+ ++E
Sbjct: 243 GAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKE 292
Score = 75.9 bits (185), Expect = 3e-12
Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGS-LVSASTLFDKMVEKTVVSWATMIGAYAQ 178
+ +H + G D I N L+ MY+ C S L A +F+++ + V++W +I AY Q
Sbjct: 284 RAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQ 343
Query: 179 WGSASEAVELFQRMEYESVKPNEVILINVLTACA 280
+G A +A+++F++M+ E+V PNE+ L NVL+ACA
Sbjct: 344 YGQAKDALDIFKQMQLENVAPNEITLSNVLSACA 377
Score = 64.7 bits (156), Expect = 7e-09
Identities = 31/93 (33%), Positives = 54/93 (58%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
K +H D ++N+LM MY+ CGSL +F + +K++VSW+T+I AYAQ
Sbjct: 386 KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH 445
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACA 280
G + +E F + E + ++V +++ L+AC+
Sbjct: 446 GHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478
>ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein
SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 100 bits (248), Expect = 2e-19
Identities = 48/110 (43%), Positives = 71/110 (64%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
+++ V G + DS +QN L+ MYS CGSL SA +FD++ + V++W TMI YA+
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACAKVRNLEMVQWIHKYMEE 331
G+A++A+ELFQRM KPN V I +LTAC + +LE + IH+ + E
Sbjct: 243 GAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVRE 292
Score = 75.9 bits (185), Expect = 3e-12
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGS-LVSASTLFDKMVEKTVVSWATMIGAYAQ 178
+ +H + G D I N L+ MY+ C S L A +F++M + V++W +I AY Q
Sbjct: 284 RAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQ 343
Query: 179 WGSASEAVELFQRMEYESVKPNEVILINVLTACA 280
+G A +A+++F++M+ E+V PNE+ L NVL+ACA
Sbjct: 344 YGQAKDALDIFKQMQLENVAPNEITLSNVLSACA 377
Score = 64.7 bits (156), Expect = 7e-09
Identities = 31/93 (33%), Positives = 54/93 (58%)
Frame = +2
Query: 2 KQLHCHCVKFGLSLDSYIQNTLMYMYSNCGSLVSASTLFDKMVEKTVVSWATMIGAYAQW 181
K +H D ++N+LM MY+ CGSL +F + +K++VSW+T+I AYAQ
Sbjct: 386 KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH 445
Query: 182 GSASEAVELFQRMEYESVKPNEVILINVLTACA 280
G + +E F + E + ++V +++ L+AC+
Sbjct: 446 GHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478