BLASTX nr result

ID: Coptis24_contig00031161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031161
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275748.1| PREDICTED: uncharacterized protein LOC100265...   108   5e-22
emb|CAN65097.1| hypothetical protein VITISV_039722 [Vitis vinifera]   108   6e-22
ref|XP_003548916.1| PREDICTED: uncharacterized protein LOC100778...    94   1e-17
ref|XP_003528437.1| PREDICTED: uncharacterized protein LOC100796...    92   4e-17
ref|XP_003542065.1| PREDICTED: uncharacterized protein LOC100812...    91   1e-16

>ref|XP_002275748.1| PREDICTED: uncharacterized protein LOC100265239 [Vitis vinifera]
           gi|297743028|emb|CBI35895.3| unnamed protein product
           [Vitis vinifera]
          Length = 631

 Score =  108 bits (270), Expect = 5e-22
 Identities = 62/109 (56%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
 Frame = +3

Query: 12  PSSSSN-GSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALNAD-D 185
           PS   N G     K  G E SSR +L+YL TCFIGL VEVQ+K+GSI SGIFHA NAD D
Sbjct: 37  PSRLPNAGVFTGTKGGGYESSSRDRLVYLTTCFIGLPVEVQVKNGSIISGIFHATNADKD 96

Query: 186 AGVVLKMVRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAKDV 332
            G+VLKM R  K G V  +   SDSV +   K +IIP++++VQVIAKDV
Sbjct: 97  FGIVLKMARLTKDGPVRGQKAISDSVSKAPSKILIIPAKELVQVIAKDV 145


>emb|CAN65097.1| hypothetical protein VITISV_039722 [Vitis vinifera]
          Length = 511

 Score =  108 bits (269), Expect = 6e-22
 Identities = 59/102 (57%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
 Frame = +3

Query: 30  GSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALNAD-DAGVVLKM 206
           G     K  G E SSR +L+YL TCFIGL VEVQ+K+GSI SGIFHA NAD D G+VLKM
Sbjct: 48  GVFTGTKGGGYESSSRDRLVYLTTCFIGLPVEVQVKNGSIISGIFHATNADKDFGIVLKM 107

Query: 207 VRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAKDV 332
            R  K G V  +   SDSV +   K +IIP++++VQVIAKDV
Sbjct: 108 ARLTKDGPVRGQKAISDSVSKAPSKILIIPAKELVQVIAKDV 149


>ref|XP_003548916.1| PREDICTED: uncharacterized protein LOC100778053 [Glycine max]
          Length = 624

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
 Frame = +3

Query: 9   KPSSSSN----GSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALN 176
           K +SSS     G +  NK  G    S  +L+YL TC IG  VEVQ+K+GSI+SGIFHA N
Sbjct: 36  KSNSSSRLAGTGVVTGNKGGGYGSPSHDRLVYLTTCLIGQHVEVQVKNGSIYSGIFHATN 95

Query: 177 AD-DAGVVLKMVRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAKDV 332
           +D D G++LKM R  K  +++ +    + V     KT+IIP+ D+ QVIAKDV
Sbjct: 96  SDKDFGIILKMARLTKAASLQGQGSGVEFVSEAPSKTLIIPANDLAQVIAKDV 148


>ref|XP_003528437.1| PREDICTED: uncharacterized protein LOC100796073 [Glycine max]
          Length = 621

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/109 (45%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = +3

Query: 9   KPSSSSNGSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALNA-DD 185
           K ++SS  ++  NK       S  +L+YL TC IG  VEVQ+K+GSI+SGIFHA N+  D
Sbjct: 36  KSNASSRLAMTGNKGGSYGSPSHDRLVYLKTCLIGQHVEVQVKNGSIYSGIFHATNSGKD 95

Query: 186 AGVVLKMVRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAKDV 332
            G++LKM    K   ++ K    + V +   KT+IIP+ D+VQVIAKDV
Sbjct: 96  FGIILKMAHLTKDAALQGKESGVEFVSKAPFKTLIIPANDLVQVIAKDV 144


>ref|XP_003542065.1| PREDICTED: uncharacterized protein LOC100812754 [Glycine max]
          Length = 640

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/102 (45%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
 Frame = +3

Query: 30  GSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALNAD-DAGVVLKM 206
           G++  +K    E  S  +L+Y+ TC IG  VEVQ+K+GSI+SGIFHA N D D G++LKM
Sbjct: 46  GAVTGSKGGSYESPSHDRLVYVTTCLIGHQVEVQVKNGSIYSGIFHATNTDKDFGIILKM 105

Query: 207 VRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAKDV 332
            R  K G++  +   ++ V +  +K +IIP++D+VQV A+DV
Sbjct: 106 ARLTKDGSLRGQKSGTEFVSKPPLKILIIPAKDLVQVTAQDV 147


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