BLASTX nr result

ID: Coptis24_contig00031098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031098
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably ina...   137   7e-31
ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_004144659.1| PREDICTED: probably inactive leucine-rich re...   133   2e-29
ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, ...   130   1e-28

>ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably inactive leucine-rich
           repeat receptor-like protein kinase At5g06940-like
           [Vitis vinifera]
          Length = 887

 Score =  137 bits (346), Expect = 7e-31
 Identities = 73/121 (60%), Positives = 85/121 (70%)
 Frame = -2

Query: 368 IYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNWTGVXXXXX 189
           ++ SL ++ FI+   +A  E +IL+TFK SIEDP+  LSTWS  S TH CNWTGV     
Sbjct: 9   LFFSLTFAFFIV--ASASSEAEILLTFKASIEDPMKYLSTWSNTSETHHCNWTGVTCTTT 66

Query: 188 XXXXXXXXSLNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQCNGWETLNL 9
                    LNLQ LNLSGEIS SLC L +LS+LNLADNLFNQPIPLHLSQC+  ETLNL
Sbjct: 67  PPLSVTS--LNLQSLNLSGEISASLCGLHNLSYLNLADNLFNQPIPLHLSQCSSLETLNL 124

Query: 8   S 6
           S
Sbjct: 125 S 125


>ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|222867933|gb|EEF05064.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/129 (54%), Positives = 85/129 (65%)
 Frame = -2

Query: 392 MATTFKALIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 213
           MATT      L L  + F+  T  +  E DIL++FK SI+DP NSLS+WS +SN H CNW
Sbjct: 1   MATTCTYTFALCLSLAFFMCSTAASSTEADILLSFKDSIQDPKNSLSSWSNSSNAHHCNW 60

Query: 212 TGVXXXXXXXXXXXXXSLNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQC 33
           TG+              LNLQ LNLSGEIS S+C L++L  LNLADN FNQPIPLHLSQC
Sbjct: 61  TGITCSTSPSLTVTS--LNLQNLNLSGEISSSICDLTNLGLLNLADNFFNQPIPLHLSQC 118

Query: 32  NGWETLNLS 6
           +  E+LN+S
Sbjct: 119 SSLESLNVS 127


>ref|XP_004144659.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At5g06940-like [Cucumis sativus]
           gi|449517277|ref|XP_004165672.1| PREDICTED: probably
           inactive leucine-rich repeat receptor-like protein
           kinase At5g06940-like [Cucumis sativus]
          Length = 889

 Score =  133 bits (334), Expect = 2e-29
 Identities = 72/130 (55%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
 Frame = -2

Query: 392 MATTFKALIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 213
           MA+ FK    LSL ++ FIL  +++ + T  L+TFK SI+D  NSLS W  +S TH CNW
Sbjct: 1   MASPFKPPFLLSLAFAFFILGYSSSEEPT--LLTFKASIKDSTNSLSNWVSSSQTHFCNW 58

Query: 212 TGVXXXXXXXXXXXXXS-LNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQ 36
           TG+             S ++LQGLNLSGEIS S+C+L  L+HLNLADN FNQPIPLHLSQ
Sbjct: 59  TGIACVTSSSPSLLSVSAIDLQGLNLSGEISSSICELPRLAHLNLADNRFNQPIPLHLSQ 118

Query: 35  CNGWETLNLS 6
           C   ETLNLS
Sbjct: 119 CRSLETLNLS 128


>ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|222872917|gb|EEF10048.1|
           predicted protein [Populus trichocarpa]
          Length = 883

 Score =  131 bits (330), Expect = 5e-29
 Identities = 68/129 (52%), Positives = 87/129 (67%)
 Frame = -2

Query: 392 MATTFKALIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 213
           MATT      L L  + F+  + ++  E D+L++FK SI+DP N+LS+WS NS  H CNW
Sbjct: 1   MATTCTCTFVLCLSLTFFMFSSASST-EADVLLSFKGSIQDPKNTLSSWSSNSTVHYCNW 59

Query: 212 TGVXXXXXXXXXXXXXSLNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQC 33
           TG+              LNLQ LNLSGEIS S+C+L++L+ LNLADN FNQPIPLHLSQC
Sbjct: 60  TGITCTTSPPLTLTS--LNLQSLNLSGEISSSICELTNLALLNLADNFFNQPIPLHLSQC 117

Query: 32  NGWETLNLS 6
           +  E+LNLS
Sbjct: 118 SSLESLNLS 126


>ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223533938|gb|EEF35663.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 891

 Score =  130 bits (326), Expect = 1e-28
 Identities = 68/119 (57%), Positives = 83/119 (69%)
 Frame = -2

Query: 362 LSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNWTGVXXXXXXX 183
           LSL  S  +   ++A  E DIL++FK SI+DP N+LS+WS  SN H CNWTGV       
Sbjct: 13  LSLTLSFTLSILSSASTEADILVSFKASIQDPKNALSSWSSGSNVHHCNWTGVTCSSTPS 72

Query: 182 XXXXXXSLNLQGLNLSGEISPSLCQLSSLSHLNLADNLFNQPIPLHLSQCNGWETLNLS 6
                  LNLQ LNLSGEIS ++CQL++L+ LNLADNLFNQPIPLHLS+C+   TLNLS
Sbjct: 73  LVTVTS-LNLQSLNLSGEISSTICQLANLTVLNLADNLFNQPIPLHLSECSSLVTLNLS 130


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