BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031037
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_002524769.1| pentatricopeptide repeat-containing protein,...    57   2e-06
ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
           [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
           protein product [Vitis vinifera]
          Length = 494

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/65 (53%), Positives = 44/65 (67%)
 Frame = -3

Query: 205 VAQLCDELVSNQFHSKKVFGILEDKAVPLIRIYSNGSGFVSLLQKLKPWPLLALEVFNWR 26
           V+QL DELV +   S  V  +LE+K   L R YSNGS FV LL++L  WP LAL+VFNWR
Sbjct: 66  VSQLRDELVPSGDDSDMVVRVLEEKGESLFRSYSNGSAFVELLKQLSSWPYLALQVFNWR 125

Query: 25  RKKCE 11
           R + +
Sbjct: 126 RNQTD 130


>ref|XP_002524769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535953|gb|EEF37612.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 509

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/65 (47%), Positives = 42/65 (64%)
 Frame = -3

Query: 205 VAQLCDELVSNQFHSKKVFGILEDKAVPLIRIYSNGSGFVSLLQKLKPWPLLALEVFNWR 26
           V+ L DELV +   S K F +LE++   L R+ S+ S  V LL++L   P LA+EVFNWR
Sbjct: 81  VSHLRDELVQHAEDSDKFFRVLEEQGDSLFRMRSDRSALVELLRQLVSLPHLAVEVFNWR 140

Query: 25  RKKCE 11
           RK+ E
Sbjct: 141 RKQTE 145


>ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Cucumis sativus]
           gi|449494249|ref|XP_004159492.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g30780-like [Cucumis sativus]
          Length = 514

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = -3

Query: 205 VAQLCDELVSNQFHSKKVFGILEDKAVPLIRIYSNGSGFVSLLQKLKPWPLLALEVFNWR 26
           V ++  EL+ N   S K+  ILED    L+  +++GS FV LL++L   P LALEVFNWR
Sbjct: 85  VLEVSHELILNSEDSNKIVKILEDSKDLLLWKHTDGSAFVELLKQLGSQPNLALEVFNWR 144

Query: 25  RKK 17
           R++
Sbjct: 145 RRQ 147