BLASTX nr result

ID: Coptis24_contig00031015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031015
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI16480.1| NBS-LRR resistance protein [Solanum bulbocastanum]     192   2e-47
gb|AFC90281.1| nucleotide-binding site leucine-rich repeat prote...   187   6e-46
sp|Q7XA40.2|RGA3_SOLBU RecName: Full=Putative disease resistance...   187   1e-45
gb|AAP45181.2| Disease resistant protein rga3, putative [Solanum...   187   1e-45
gb|AAR29073.1| blight resistance protein B149, partial [Solanum ...   186   1e-45

>gb|ACI16480.1| NBS-LRR resistance protein [Solanum bulbocastanum]
          Length = 988

 Score =  192 bits (489), Expect = 2e-47
 Identities = 96/155 (61%), Positives = 119/155 (76%)
 Frame = -2

Query: 465 FLLVLDDVWSEDQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDE 286
           +LLVLDDVW+EDQDKW K+R  L  GA G+SVL TTRL+ V  ++GT+  Y L+ LS+++
Sbjct: 257 YLLVLDDVWNEDQDKWAKLRQVLKVGASGASVLTTTRLEKVGSIMGTLQPYELSNLSQED 316

Query: 285 CLSLFRGRAFGREDEESNASLVEIGKQIVKKCGGMPLVAKVLGALMRFKREVREWSSVRD 106
           C  LF  RAFG + EE N +LV IGK+IVKKCGG+PL AK LG ++RFKRE R+W  VRD
Sbjct: 317 CWLLFMQRAFGHQ-EEINLNLVAIGKEIVKKCGGVPLAAKTLGGILRFKREERQWEHVRD 375

Query: 105 SEIWELPEEEGGAILGVLRLSYDHLPPYLRQCFSY 1
           SEIW+LP+EE  +IL  LRLSY HLP  LRQCF+Y
Sbjct: 376 SEIWKLPQEE-SSILPALRLSYHHLPLDLRQCFTY 409


>gb|AFC90281.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron kanehirai]
          Length = 296

 Score =  187 bits (476), Expect = 6e-46
 Identities = 91/155 (58%), Positives = 116/155 (74%)
 Frame = -2

Query: 465 FLLVLDDVWSEDQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDE 286
           +LLVLDDVW+E  +KWD+++  L CGAKGS V+VTTR Q VAL++ T+P++ +  LSED+
Sbjct: 73  YLLVLDDVWNEYHEKWDRLKDVLRCGAKGSKVVVTTRSQKVALIMATLPLHLMVGLSEDD 132

Query: 285 CLSLFRGRAFGREDEESNASLVEIGKQIVKKCGGMPLVAKVLGALMRFKREVREWSSVRD 106
             SLF  RAF     E N  L +IGK IVKKCGG+PL  K LG+LM+FK    EW SVRD
Sbjct: 133 SWSLFEQRAFANRRMEKNHELFQIGKAIVKKCGGLPLAIKALGSLMQFKSSESEWLSVRD 192

Query: 105 SEIWELPEEEGGAILGVLRLSYDHLPPYLRQCFSY 1
           S+IW+LP ++G  IL VLRL YD+LPP+LRQCF+Y
Sbjct: 193 SKIWDLP-DDGSTILPVLRLRYDNLPPHLRQCFAY 226


>sp|Q7XA40.2|RGA3_SOLBU RecName: Full=Putative disease resistance protein RGA3; AltName:
           Full=Blight resistance protein B149; AltName:
           Full=RGA1-blb gi|39636723|gb|AAR29070.1| blight
           resistance protein RGA1 [Solanum bulbocastanum]
           gi|113208411|gb|AAP45165.2| Disease resistance protein
           RGA3, putative [Solanum bulbocastanum]
          Length = 992

 Score =  187 bits (474), Expect = 1e-45
 Identities = 89/155 (57%), Positives = 117/155 (75%)
 Frame = -2

Query: 465 FLLVLDDVWSEDQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDE 286
           + LVLDDVW+EDQ+KWD +R  L  GA G+S+L+TTRL+ +  ++GT+ +Y L+ LS+++
Sbjct: 256 YFLVLDDVWNEDQEKWDNLRAVLKIGASGASILITTRLEKIGSIMGTLQLYQLSNLSQED 315

Query: 285 CLSLFRGRAFGREDEESNASLVEIGKQIVKKCGGMPLVAKVLGALMRFKREVREWSSVRD 106
           C  LF+ RAF  + E S   L+EIGK+IVKKCGG+PL AK LG L+RFKRE  EW  VRD
Sbjct: 316 CWLLFKQRAFCHQTETS-PKLMEIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRD 374

Query: 105 SEIWELPEEEGGAILGVLRLSYDHLPPYLRQCFSY 1
           SEIW LP++E  ++L  LRLSY HLP  LRQCF+Y
Sbjct: 375 SEIWNLPQDE-NSVLPALRLSYHHLPLDLRQCFAY 408


>gb|AAP45181.2| Disease resistant protein rga3, putative [Solanum bulbocastanum]
          Length = 953

 Score =  187 bits (474), Expect = 1e-45
 Identities = 89/155 (57%), Positives = 117/155 (75%)
 Frame = -2

Query: 465 FLLVLDDVWSEDQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDE 286
           + LVLDDVW+EDQ+KWD +R  L  GA G+S+L+TTRL+ +  ++GT+ +Y L+ LS+++
Sbjct: 256 YFLVLDDVWNEDQEKWDNLRAVLKIGASGASILITTRLEKIGSIMGTLQLYQLSNLSQED 315

Query: 285 CLSLFRGRAFGREDEESNASLVEIGKQIVKKCGGMPLVAKVLGALMRFKREVREWSSVRD 106
           C  LF+ RAF  + E S   L+EIGK+IVKKCGG+PL AK LG L+RFKRE  EW  VRD
Sbjct: 316 CWLLFKQRAFCHQTETS-PKLMEIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRD 374

Query: 105 SEIWELPEEEGGAILGVLRLSYDHLPPYLRQCFSY 1
           SEIW LP++E  ++L  LRLSY HLP  LRQCF+Y
Sbjct: 375 SEIWNLPQDE-NSVLPALRLSYHHLPLDLRQCFAY 408


>gb|AAR29073.1| blight resistance protein B149, partial [Solanum bulbocastanum]
          Length = 971

 Score =  186 bits (473), Expect = 1e-45
 Identities = 89/155 (57%), Positives = 117/155 (75%)
 Frame = -2

Query: 465 FLLVLDDVWSEDQDKWDKVRCSLTCGAKGSSVLVTTRLQTVALVLGTVPVYNLTTLSEDE 286
           + LVLDDVW+EDQ+KWD +R  L  GA G+S+L+TTRL+ +  ++GT+ +Y L+ LS+++
Sbjct: 256 YFLVLDDVWNEDQEKWDNLRAVLKIGASGASILITTRLEKIGSIMGTLQLYQLSNLSQED 315

Query: 285 CLSLFRGRAFGREDEESNASLVEIGKQIVKKCGGMPLVAKVLGALMRFKREVREWSSVRD 106
           C  LF+ RAF  + E S   L+EIGK+IVKKCGG+PL AK LG L+RFKRE  EW  VRD
Sbjct: 316 CWLLFKQRAFCHQTETS-PKLMEIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRD 374

Query: 105 SEIWELPEEEGGAILGVLRLSYDHLPPYLRQCFSY 1
           SEIW LP++E  ++L  LRLSY HLP  LRQCF+Y
Sbjct: 375 SEIWXLPQDE-NSVLPALRLSYHHLPLDLRQCFAY 408


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