BLASTX nr result

ID: Coptis24_contig00030988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030988
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_002517715.1| nuclease, putative [Ricinus communis] gi|223...   141   5e-32
ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203...   140   8e-32
ref|XP_003537333.1| PREDICTED: structure-specific endonuclease s...   136   2e-30

>ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|222862530|gb|EEF00037.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  142 bits (359), Expect = 2e-32
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = +2

Query: 80  QVGEEKKGGFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGARRTKSKRPWE 259
           +  E+ K GFFACYLL SLCPRFK HTYIGFT+NP RRIRQHNGE+ SGA RTK +RPWE
Sbjct: 18  EAAEKGKNGFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGELRSGACRTKKRRPWE 77

Query: 260 MILCVYGFPTNVSALQFEWA 319
           M++CVYGFPTNV+ALQFEWA
Sbjct: 78  MVICVYGFPTNVAALQFEWA 97


>ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|222857794|gb|EEE95341.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  142 bits (357), Expect = 4e-32
 Identities = 63/82 (76%), Positives = 72/82 (87%), Gaps = 2/82 (2%)
 Frame = +2

Query: 80  QVGEEKKG--GFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGARRTKSKRP 253
           ++GE +KG  GFFACYLL SLCPRFK HTYIGFT+NP RRIRQHNGE+ SGA RTK +RP
Sbjct: 1   ELGEAEKGKNGFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGELRSGACRTKKRRP 60

Query: 254 WEMILCVYGFPTNVSALQFEWA 319
           WEM+ C+YGFPTNV+ALQFEWA
Sbjct: 61  WEMVFCIYGFPTNVAALQFEWA 82


>ref|XP_002517715.1| nuclease, putative [Ricinus communis] gi|223543113|gb|EEF44647.1|
           nuclease, putative [Ricinus communis]
          Length = 413

 Score =  141 bits (356), Expect = 5e-32
 Identities = 63/80 (78%), Positives = 69/80 (86%)
 Frame = +2

Query: 80  QVGEEKKGGFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGARRTKSKRPWE 259
           Q  EE+  GF+ACYLL SLCPRFK HTYIGFT+NP RRIRQHNGEI SGA RTK +RPWE
Sbjct: 18  QEDEEEGKGFYACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEIRSGAFRTKKRRPWE 77

Query: 260 MILCVYGFPTNVSALQFEWA 319
           M+ C+YGFPTNVSALQFEWA
Sbjct: 78  MVFCIYGFPTNVSALQFEWA 97


>ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203492 [Cucumis sativus]
           gi|449471301|ref|XP_004153269.1| PREDICTED:
           uncharacterized protein LOC101204996 [Cucumis sativus]
           gi|449506301|ref|XP_004162709.1| PREDICTED:
           uncharacterized protein LOC101229010 [Cucumis sativus]
          Length = 395

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/89 (73%), Positives = 72/89 (80%)
 Frame = +2

Query: 53  QNEEDCVREQVGEEKKGGFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGAR 232
           + +ED   E+ G E  G FF+CYLL S CPRFK HTYIGFT+NP RRIRQHNGEI  GA 
Sbjct: 16  EEKEDDEEEERGNEVNG-FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAW 74

Query: 233 RTKSKRPWEMILCVYGFPTNVSALQFEWA 319
           RTK KRPWEM+LC+YGFPTNVSALQFEWA
Sbjct: 75  RTKRKRPWEMVLCIYGFPTNVSALQFEWA 103


>ref|XP_003537333.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
           [Glycine max]
          Length = 380

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/90 (73%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
 Frame = +2

Query: 53  QNE-EDCVREQVGEEKKGGFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGA 229
           QNE EDC        +  GFFACYLL SL PRFK HTYIGFT+NP RRIRQHNGEI  GA
Sbjct: 24  QNENEDC--------EGNGFFACYLLTSLSPRFKGHTYIGFTVNPRRRIRQHNGEIGCGA 75

Query: 230 RRTKSKRPWEMILCVYGFPTNVSALQFEWA 319
            RTK +RPWEM+LC+YGFPTNVSALQFEWA
Sbjct: 76  WRTKKRRPWEMVLCIYGFPTNVSALQFEWA 105


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