BLASTX nr result

ID: Coptis24_contig00030987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030987
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34297.1| WD-repeat protein [Cucumis melo subsp. melo]            74   1e-11
ref|XP_002511007.1| WD-repeat protein, putative [Ricinus communi...    74   2e-11
ref|NP_001065400.1| Os10g0563300 [Oryza sativa Japonica Group] g...    73   2e-11
tpg|DAA63293.1| TPA: hypothetical protein ZEAMMB73_318247 [Zea m...    73   2e-11
ref|XP_002264669.2| PREDICTED: WD repeat-containing protein WRAP...    73   2e-11

>gb|ADN34297.1| WD-repeat protein [Cucumis melo subsp. melo]
          Length = 420

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -1

Query: 155 LFILIWSLVNTACVHVQWPKHASKGVSFTKDGKFAAI 45
           L +++WSLVNTACVHVQWPKH SKGVSFTKDGKFAA+
Sbjct: 79  LRLIVWSLVNTACVHVQWPKHTSKGVSFTKDGKFAAV 115


>ref|XP_002511007.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550122|gb|EEF51609.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 458

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -1

Query: 155 LFILIWSLVNTACVHVQWPKHASKGVSFTKDGKFAAI 45
           L + +WSLVNTACVHVQWPKHASKG+SFTKDGKFAAI
Sbjct: 113 LRLTVWSLVNTACVHVQWPKHASKGLSFTKDGKFAAI 149


>ref|NP_001065400.1| Os10g0563300 [Oryza sativa Japonica Group]
           gi|12597885|gb|AAG60193.1|AC084763_13 putative WD40
           protein [Oryza sativa Japonica Group]
           gi|31433536|gb|AAP55034.1| WD-repeat protein 8,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113639932|dbj|BAF27237.1| Os10g0563300 [Oryza sativa
           Japonica Group] gi|125532972|gb|EAY79537.1| hypothetical
           protein OsI_34666 [Oryza sativa Indica Group]
           gi|125575708|gb|EAZ16992.1| hypothetical protein
           OsJ_32477 [Oryza sativa Japonica Group]
          Length = 470

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -1

Query: 155 LFILIWSLVNTACVHVQWPKHASKGVSFTKDGKFAAI 45
           L + +WSLVNTAC+HVQWPKHAS+GVSFTKDGKFAAI
Sbjct: 113 LRLTVWSLVNTACIHVQWPKHASRGVSFTKDGKFAAI 149


>tpg|DAA63293.1| TPA: hypothetical protein ZEAMMB73_318247 [Zea mays]
          Length = 494

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = -1

Query: 155 LFILIWSLVNTACVHVQWPKHASKGVSFTKDGKFAAI 45
           L + +WSLVNTACVHVQWPKH SKGVSFTKDGKFAAI
Sbjct: 114 LRLTVWSLVNTACVHVQWPKHGSKGVSFTKDGKFAAI 150


>ref|XP_002264669.2| PREDICTED: WD repeat-containing protein WRAP73 [Vitis vinifera]
          Length = 460

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -1

Query: 155 LFILIWSLVNTACVHVQWPKHASKGVSFTKDGKFAAI 45
           L + +WSLVNTACVHVQWPKHASKGVSFT+DGKFAAI
Sbjct: 113 LRLTVWSLVNTACVHVQWPKHASKGVSFTQDGKFAAI 149


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