BLASTX nr result
ID: Coptis24_contig00030986
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030986 (389 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003577651.1| PREDICTED: AP-2 complex subunit sigma-like [... 58 7e-07 ref|XP_003578788.1| PREDICTED: AP-2 complex subunit sigma-like [... 58 7e-07 gb|ACI66179.1| AP-2 complex subunit sigma-1 [Salmo salar] 58 7e-07 ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [... 57 2e-06 gb|AFK39902.1| unknown [Lotus japonicus] 57 2e-06 >ref|XP_003577651.1| PREDICTED: AP-2 complex subunit sigma-like [Brachypodium distachyon] Length = 142 Score = 58.2 bits (139), Expect = 7e-07 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = +1 Query: 1 LDEFILAGELQETSKKAIIERMGELEKLD 87 LDEFILAGELQETSKKAIIERMGELEKLD Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLD 142 >ref|XP_003578788.1| PREDICTED: AP-2 complex subunit sigma-like [Brachypodium distachyon] gi|326523623|dbj|BAJ92982.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326532016|dbj|BAK01384.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 142 Score = 58.2 bits (139), Expect = 7e-07 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = +1 Query: 1 LDEFILAGELQETSKKAIIERMGELEKLD 87 LDEFILAGELQETSKKAIIERMGELEKLD Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLD 142 >gb|ACI66179.1| AP-2 complex subunit sigma-1 [Salmo salar] Length = 142 Score = 58.2 bits (139), Expect = 7e-07 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = +1 Query: 1 LDEFILAGELQETSKKAIIERMGELEKLD 87 LDEFILAGELQETSKKAIIERMGELEKLD Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLD 142 >ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [Cucumis sativus] gi|449505752|ref|XP_004162559.1| PREDICTED: AP-2 complex subunit sigma-like [Cucumis sativus] Length = 142 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = +1 Query: 1 LDEFILAGELQETSKKAIIERMGELEKLD 87 LDEFILAGELQETSKKAIIERMGELEKL+ Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLE 142 >gb|AFK39902.1| unknown [Lotus japonicus] Length = 142 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = +1 Query: 1 LDEFILAGELQETSKKAIIERMGELEKLD 87 LDEFILAGELQETSKKAIIERMGELEKL+ Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLE 142