BLASTX nr result

ID: Coptis24_contig00030986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030986
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003577651.1| PREDICTED: AP-2 complex subunit sigma-like [...    58   7e-07
ref|XP_003578788.1| PREDICTED: AP-2 complex subunit sigma-like [...    58   7e-07
gb|ACI66179.1| AP-2 complex subunit sigma-1 [Salmo salar]              58   7e-07
ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [...    57   2e-06
gb|AFK39902.1| unknown [Lotus japonicus]                               57   2e-06

>ref|XP_003577651.1| PREDICTED: AP-2 complex subunit sigma-like [Brachypodium
           distachyon]
          Length = 142

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   LDEFILAGELQETSKKAIIERMGELEKLD 87
           LDEFILAGELQETSKKAIIERMGELEKLD
Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLD 142


>ref|XP_003578788.1| PREDICTED: AP-2 complex subunit sigma-like [Brachypodium
           distachyon] gi|326523623|dbj|BAJ92982.1| predicted
           protein [Hordeum vulgare subsp. vulgare]
           gi|326532016|dbj|BAK01384.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 142

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   LDEFILAGELQETSKKAIIERMGELEKLD 87
           LDEFILAGELQETSKKAIIERMGELEKLD
Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLD 142


>gb|ACI66179.1| AP-2 complex subunit sigma-1 [Salmo salar]
          Length = 142

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   LDEFILAGELQETSKKAIIERMGELEKLD 87
           LDEFILAGELQETSKKAIIERMGELEKLD
Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLD 142


>ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [Cucumis sativus]
           gi|449505752|ref|XP_004162559.1| PREDICTED: AP-2 complex
           subunit sigma-like [Cucumis sativus]
          Length = 142

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   LDEFILAGELQETSKKAIIERMGELEKLD 87
           LDEFILAGELQETSKKAIIERMGELEKL+
Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLE 142


>gb|AFK39902.1| unknown [Lotus japonicus]
          Length = 142

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   LDEFILAGELQETSKKAIIERMGELEKLD 87
           LDEFILAGELQETSKKAIIERMGELEKL+
Sbjct: 114 LDEFILAGELQETSKKAIIERMGELEKLE 142


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