BLASTX nr result
ID: Coptis24_contig00030983
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030983 (224 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003614469.1| Helicase-like protein [Medicago truncatula] ... 69 4e-10 gb|EEC75756.1| hypothetical protein OsI_12651 [Oryza sativa Indi... 65 8e-09 ref|NP_001175358.1| Os08g0112000 [Oryza sativa Japonica Group] g... 60 2e-07 ref|NP_001046849.2| Os02g0480100 [Oryza sativa Japonica Group] g... 60 2e-07 gb|EEE67922.1| hypothetical protein OsJ_25793 [Oryza sativa Japo... 60 2e-07 >ref|XP_003614469.1| Helicase-like protein [Medicago truncatula] gi|355515804|gb|AES97427.1| Helicase-like protein [Medicago truncatula] Length = 377 Score = 68.9 bits (167), Expect = 4e-10 Identities = 35/74 (47%), Positives = 50/74 (67%) Frame = -1 Query: 224 GRLLQQYVVDIYVKISTQQLRFIRDNQDTLRAELCQGLHDSVQMGETNAGIYIILVAILN 45 GRLLQQYVVD YVKI T++LR++R NQ+ +R+EL QGL D++ GETNA + + + + Sbjct: 294 GRLLQQYVVDNYVKIETRRLRWMRRNQNNIRSELYQGLQDALYDGETNASVLVPHILLRL 353 Query: 44 QYYSSELKLTLDCI 3 S +K C+ Sbjct: 354 PNKSMVVKFNPKCL 367 >gb|EEC75756.1| hypothetical protein OsI_12651 [Oryza sativa Indica Group] Length = 646 Score = 64.7 bits (156), Expect = 8e-09 Identities = 30/73 (41%), Positives = 51/73 (69%), Gaps = 2/73 (2%) Frame = -1 Query: 224 GRLLQQYVVDIYVKISTQQLRFIRDNQDTLRAELCQGLHDSVQMGETNAGI--YIILVAI 51 GRL QQ+ VD+Y+K+ + +L ++R+NQ +RA+L QGL DS+Q GE+ A Y+ +A+ Sbjct: 454 GRLFQQFAVDMYIKVESSRLDYVRNNQKEIRADLYQGLMDSIQAGESRASARRYMDAMAL 513 Query: 50 LNQYYSSELKLTL 12 + +Y ++ LT+ Sbjct: 514 VQKYGKPDVFLTM 526 >ref|NP_001175358.1| Os08g0112000 [Oryza sativa Japonica Group] gi|255678104|dbj|BAH94086.1| Os08g0112000 [Oryza sativa Japonica Group] Length = 1481 Score = 59.7 bits (143), Expect = 2e-07 Identities = 25/49 (51%), Positives = 38/49 (77%) Frame = -1 Query: 224 GRLLQQYVVDIYVKISTQQLRFIRDNQDTLRAELCQGLHDSVQMGETNA 78 GRL QQ+ VD+Y+K+ + +L ++R+NQ +RA+L QGL DS+Q GE+ A Sbjct: 593 GRLFQQFAVDMYIKVESSRLDYVRNNQKEIRADLYQGLMDSIQAGESRA 641 >ref|NP_001046849.2| Os02g0480100 [Oryza sativa Japonica Group] gi|255670903|dbj|BAF08763.2| Os02g0480100 [Oryza sativa Japonica Group] Length = 1466 Score = 59.7 bits (143), Expect = 2e-07 Identities = 25/49 (51%), Positives = 38/49 (77%) Frame = -1 Query: 224 GRLLQQYVVDIYVKISTQQLRFIRDNQDTLRAELCQGLHDSVQMGETNA 78 GRL QQ+ VD+Y+K+ + +L ++R+NQ +RA+L QGL DS+Q GE+ A Sbjct: 584 GRLFQQFAVDMYIKVESSRLDYVRNNQKEIRADLYQGLMDSIQAGESRA 632 >gb|EEE67922.1| hypothetical protein OsJ_25793 [Oryza sativa Japonica Group] Length = 1132 Score = 59.7 bits (143), Expect = 2e-07 Identities = 25/49 (51%), Positives = 38/49 (77%) Frame = -1 Query: 224 GRLLQQYVVDIYVKISTQQLRFIRDNQDTLRAELCQGLHDSVQMGETNA 78 GRL QQ+ VD+Y+K+ + +L ++R+NQ +RA+L QGL DS+Q GE+ A Sbjct: 537 GRLFQQFAVDMYIKVESSRLDYVRNNQKEIRADLYQGLMDSIQAGESRA 585