BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030981
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39452.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]                 124   6e-27
ref|NP_171708.1| pentatricopeptide repeat-containing protein [Ar...   124   6e-27

>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/84 (73%), Positives = 75/84 (89%)
 Frame = -1

Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73
           LNAARN +FSIE KS G VKL DRFFNSLIRSYG AGLFQES+K++  MK++GV+PSV+T
Sbjct: 143 LNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVT 202

Query: 72  FNSLFAILLRRGRTNMAKKLFDEM 1
           FNSL +I+L+RGRT+MAK+LFDEM
Sbjct: 203 FNSLLSIVLKRGRTSMAKQLFDEM 226


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/84 (73%), Positives = 75/84 (89%)
 Frame = -1

Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73
           LNAARN +FSIE KS G VKL DRFFNSLIRSYG AGLFQES+K++  MK++GV+PSV+T
Sbjct: 143 LNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVT 202

Query: 72  FNSLFAILLRRGRTNMAKKLFDEM 1
           FNSL +I+L+RGRT+MAK+LFDEM
Sbjct: 203 FNSLLSIVLKRGRTSMAKQLFDEM 226


>ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/84 (71%), Positives = 72/84 (85%)
 Frame = -1

Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73
           LN ARN LFSIE  SKG VKL DRFFNSLIRSY +AGLF+ES+KL+  MK + V+PSV+T
Sbjct: 126 LNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVT 185

Query: 72  FNSLFAILLRRGRTNMAKKLFDEM 1
           FNSL +ILL+RGRTNMAK+++DEM
Sbjct: 186 FNSLMSILLKRGRTNMAKEVYDEM 209


>gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
          Length = 691

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/84 (72%), Positives = 71/84 (84%)
 Frame = -1

Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73
           LN ARN LFSIE +S G VKL DR+FNSLIRSYG AGLFQES+KL+  MKQ+G++PSV+T
Sbjct: 116 LNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLT 175

Query: 72  FNSLFAILLRRGRTNMAKKLFDEM 1
           FNSL +ILL+RGRT MA  LFDEM
Sbjct: 176 FNSLLSILLKRGRTGMAHDLFDEM 199


>ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806399|sp|O81908.2|PPR2_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
           gi|332189251|gb|AEE27372.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/84 (72%), Positives = 71/84 (84%)
 Frame = -1

Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73
           LN ARN LFSIE +S G VKL DR+FNSLIRSYG AGLFQES+KL+  MKQ+G++PSV+T
Sbjct: 116 LNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLT 175

Query: 72  FNSLFAILLRRGRTNMAKKLFDEM 1
           FNSL +ILL+RGRT MA  LFDEM
Sbjct: 176 FNSLLSILLKRGRTGMAHDLFDEM 199