BLASTX nr result
ID: Coptis24_contig00030981
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030981 (252 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39452.3| unnamed protein product [Vitis vinifera] 127 1e-27 ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27 ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containi... 125 4e-27 gb|AAC24378.1| Unknown protein [Arabidopsis thaliana] 124 6e-27 ref|NP_171708.1| pentatricopeptide repeat-containing protein [Ar... 124 6e-27 >emb|CBI39452.3| unnamed protein product [Vitis vinifera] Length = 718 Score = 127 bits (318), Expect = 1e-27 Identities = 62/84 (73%), Positives = 75/84 (89%) Frame = -1 Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73 LNAARN +FSIE KS G VKL DRFFNSLIRSYG AGLFQES+K++ MK++GV+PSV+T Sbjct: 143 LNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVT 202 Query: 72 FNSLFAILLRRGRTNMAKKLFDEM 1 FNSL +I+L+RGRT+MAK+LFDEM Sbjct: 203 FNSLLSIVLKRGRTSMAKQLFDEM 226 >ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Vitis vinifera] Length = 746 Score = 127 bits (318), Expect = 1e-27 Identities = 62/84 (73%), Positives = 75/84 (89%) Frame = -1 Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73 LNAARN +FSIE KS G VKL DRFFNSLIRSYG AGLFQES+K++ MK++GV+PSV+T Sbjct: 143 LNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVT 202 Query: 72 FNSLFAILLRRGRTNMAKKLFDEM 1 FNSL +I+L+RGRT+MAK+LFDEM Sbjct: 203 FNSLLSIVLKRGRTSMAKQLFDEM 226 >ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Glycine max] Length = 729 Score = 125 bits (314), Expect = 4e-27 Identities = 60/84 (71%), Positives = 72/84 (85%) Frame = -1 Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73 LN ARN LFSIE SKG VKL DRFFNSLIRSY +AGLF+ES+KL+ MK + V+PSV+T Sbjct: 126 LNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVT 185 Query: 72 FNSLFAILLRRGRTNMAKKLFDEM 1 FNSL +ILL+RGRTNMAK+++DEM Sbjct: 186 FNSLMSILLKRGRTNMAKEVYDEM 209 >gb|AAC24378.1| Unknown protein [Arabidopsis thaliana] Length = 691 Score = 124 bits (312), Expect = 6e-27 Identities = 61/84 (72%), Positives = 71/84 (84%) Frame = -1 Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73 LN ARN LFSIE +S G VKL DR+FNSLIRSYG AGLFQES+KL+ MKQ+G++PSV+T Sbjct: 116 LNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLT 175 Query: 72 FNSLFAILLRRGRTNMAKKLFDEM 1 FNSL +ILL+RGRT MA LFDEM Sbjct: 176 FNSLLSILLKRGRTGMAHDLFDEM 199 >ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02060, chloroplastic; Flags: Precursor gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 710 Score = 124 bits (312), Expect = 6e-27 Identities = 61/84 (72%), Positives = 71/84 (84%) Frame = -1 Query: 252 LNAARNLLFSIETKSKGNVKLHDRFFNSLIRSYGQAGLFQESLKLYMRMKQVGVAPSVIT 73 LN ARN LFSIE +S G VKL DR+FNSLIRSYG AGLFQES+KL+ MKQ+G++PSV+T Sbjct: 116 LNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLT 175 Query: 72 FNSLFAILLRRGRTNMAKKLFDEM 1 FNSL +ILL+RGRT MA LFDEM Sbjct: 176 FNSLLSILLKRGRTGMAHDLFDEM 199