BLASTX nr result

ID: Coptis24_contig00030974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030974
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002463875.1| hypothetical protein SORBIDRAFT_01g008080 [S...    81   8e-14
ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp....    79   3e-13
emb|CBI18267.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...    79   3e-13
emb|CAN80929.1| hypothetical protein VITISV_016848 [Vitis vinifera]    79   3e-13

>ref|XP_002463875.1| hypothetical protein SORBIDRAFT_01g008080 [Sorghum bicolor]
           gi|241917729|gb|EER90873.1| hypothetical protein
           SORBIDRAFT_01g008080 [Sorghum bicolor]
          Length = 1148

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 35/44 (79%), Positives = 41/44 (93%)
 Frame = -2

Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVRSFHI 73
           ND+VFVVDCGKAKETTYDALN+TPCLLPSWIS+A ARQ++S  +
Sbjct: 638 NDIVFVVDCGKAKETTYDALNNTPCLLPSWISKASARQIKSLQV 681


>ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316958|gb|EFH47380.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1160

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = -2

Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVR 85
           NDVVFVVDCGKAKETTYDALN+TPCLLPSWISQA ARQ R
Sbjct: 614 NDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 653


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = -2

Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVR 85
           NDVVFVVDCGKAKETTYDALN+TPCLLPSWISQA ARQ R
Sbjct: 591 NDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 630


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = -2

Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVR 85
           NDVVFVVDCGKAKETTYDALN+TPCLLPSWISQA ARQ R
Sbjct: 591 NDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 630


>emb|CAN80929.1| hypothetical protein VITISV_016848 [Vitis vinifera]
          Length = 462

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = -2

Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVR 85
           NDVVFVVDCGKAKETTYDALN+TPCLLPSWISQA ARQ R
Sbjct: 232 NDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 271


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