BLASTX nr result
ID: Coptis24_contig00030974
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030974 (205 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002463875.1| hypothetical protein SORBIDRAFT_01g008080 [S... 81 8e-14 ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp.... 79 3e-13 emb|CBI18267.3| unnamed protein product [Vitis vinifera] 79 3e-13 ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica... 79 3e-13 emb|CAN80929.1| hypothetical protein VITISV_016848 [Vitis vinifera] 79 3e-13 >ref|XP_002463875.1| hypothetical protein SORBIDRAFT_01g008080 [Sorghum bicolor] gi|241917729|gb|EER90873.1| hypothetical protein SORBIDRAFT_01g008080 [Sorghum bicolor] Length = 1148 Score = 81.3 bits (199), Expect = 8e-14 Identities = 35/44 (79%), Positives = 41/44 (93%) Frame = -2 Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVRSFHI 73 ND+VFVVDCGKAKETTYDALN+TPCLLPSWIS+A ARQ++S + Sbjct: 638 NDIVFVVDCGKAKETTYDALNNTPCLLPSWISKASARQIKSLQV 681 >ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316958|gb|EFH47380.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1160 Score = 79.3 bits (194), Expect = 3e-13 Identities = 37/40 (92%), Positives = 38/40 (95%) Frame = -2 Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVR 85 NDVVFVVDCGKAKETTYDALN+TPCLLPSWISQA ARQ R Sbjct: 614 NDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 653 >emb|CBI18267.3| unnamed protein product [Vitis vinifera] Length = 1162 Score = 79.3 bits (194), Expect = 3e-13 Identities = 37/40 (92%), Positives = 38/40 (95%) Frame = -2 Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVR 85 NDVVFVVDCGKAKETTYDALN+TPCLLPSWISQA ARQ R Sbjct: 591 NDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 630 >ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera] Length = 1136 Score = 79.3 bits (194), Expect = 3e-13 Identities = 37/40 (92%), Positives = 38/40 (95%) Frame = -2 Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVR 85 NDVVFVVDCGKAKETTYDALN+TPCLLPSWISQA ARQ R Sbjct: 591 NDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 630 >emb|CAN80929.1| hypothetical protein VITISV_016848 [Vitis vinifera] Length = 462 Score = 79.3 bits (194), Expect = 3e-13 Identities = 37/40 (92%), Positives = 38/40 (95%) Frame = -2 Query: 204 NDVVFVVDCGKAKETTYDALNSTPCLLPSWISQAFARQVR 85 NDVVFVVDCGKAKETTYDALN+TPCLLPSWISQA ARQ R Sbjct: 232 NDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 271