BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030968
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28722.3| unnamed protein product [Vitis vinifera]              374   e-102
ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containi...   374   e-102
ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2...   365   8e-99
ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containi...   353   2e-95
ref|XP_002524751.1| pentatricopeptide repeat-containing protein,...   349   4e-94

>emb|CBI28722.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  374 bits (961), Expect = e-102
 Identities = 182/256 (71%), Positives = 220/256 (85%)
 Frame = +1

Query: 1    TMAETILVQARDPSRLSVELENSIVECRFDDSWKLYQQYKEMEGFPRKSILNNLLTGLAE 180
            +M  TILVQARDP++L  ELEN+I   R+ D+WKL++Q+  MEGFPRKSI+N +LT  +E
Sbjct: 651  SMGGTILVQARDPAKLCEELENAIDGHRYSDAWKLFEQHMGMEGFPRKSIVNTVLTSFSE 710

Query: 181  SGDLQWLEKSHSLVELIFDEDKHELLKFETLIYLSFSLAKYGLPIPASTVLRRMVETEKY 360
            S D+QWLEK++ LVE  F E K  LL+ ETLIY+SF LA  GLP+PASTVLR++VE E++
Sbjct: 711  SLDVQWLEKAYGLVERAFAESKQNLLEKETLIYISFGLASCGLPVPASTVLRKLVEMEEF 770

Query: 361  PPVTAWSAIVAHMSRTASGAYLAAELILEIGYLFQDNRVDPRKKTNRPLLSMKPNTTVFN 540
            PPV+AWSAI+AHMS+TASGAYLAAELILEIGYLFQD RVDPRKK+NRPLL+MKPNTT FN
Sbjct: 771  PPVSAWSAILAHMSQTASGAYLAAELILEIGYLFQDGRVDPRKKSNRPLLAMKPNTTAFN 830

Query: 541  LALAGCLLFGTTRKAEQLLEMMPRVGIKADSNLLITMAHIYEINGHRDELKKLKRHIDDT 720
            +ALAGCLLFGTTRKAE+LL+MMPRVG+K D NLLI MAHIYE NG R++L+KLKRHID+ 
Sbjct: 831  IALAGCLLFGTTRKAEKLLDMMPRVGVKPDVNLLIIMAHIYERNGRREDLRKLKRHIDEA 890

Query: 721  CNLGDLQYQQFYNCLL 768
             NL D+Q++QFYNCLL
Sbjct: 891  HNLSDIQFRQFYNCLL 906


>ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Vitis vinifera]
          Length = 784

 Score =  374 bits (961), Expect = e-102
 Identities = 182/256 (71%), Positives = 220/256 (85%)
 Frame = +1

Query: 1   TMAETILVQARDPSRLSVELENSIVECRFDDSWKLYQQYKEMEGFPRKSILNNLLTGLAE 180
           +M  TILVQARDP++L  ELEN+I   R+ D+WKL++Q+  MEGFPRKSI+N +LT  +E
Sbjct: 74  SMGGTILVQARDPAKLCEELENAIDGHRYSDAWKLFEQHMGMEGFPRKSIVNTVLTSFSE 133

Query: 181 SGDLQWLEKSHSLVELIFDEDKHELLKFETLIYLSFSLAKYGLPIPASTVLRRMVETEKY 360
           S D+QWLEK++ LVE  F E K  LL+ ETLIY+SF LA  GLP+PASTVLR++VE E++
Sbjct: 134 SLDVQWLEKAYGLVERAFAESKQNLLEKETLIYISFGLASCGLPVPASTVLRKLVEMEEF 193

Query: 361 PPVTAWSAIVAHMSRTASGAYLAAELILEIGYLFQDNRVDPRKKTNRPLLSMKPNTTVFN 540
           PPV+AWSAI+AHMS+TASGAYLAAELILEIGYLFQD RVDPRKK+NRPLL+MKPNTT FN
Sbjct: 194 PPVSAWSAILAHMSQTASGAYLAAELILEIGYLFQDGRVDPRKKSNRPLLAMKPNTTAFN 253

Query: 541 LALAGCLLFGTTRKAEQLLEMMPRVGIKADSNLLITMAHIYEINGHRDELKKLKRHIDDT 720
           +ALAGCLLFGTTRKAE+LL+MMPRVG+K D NLLI MAHIYE NG R++L+KLKRHID+ 
Sbjct: 254 IALAGCLLFGTTRKAEKLLDMMPRVGVKPDVNLLIIMAHIYERNGRREDLRKLKRHIDEA 313

Query: 721 CNLGDLQYQQFYNCLL 768
            NL D+Q++QFYNCLL
Sbjct: 314 HNLSDIQFRQFYNCLL 329


>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score =  365 bits (936), Expect = 8e-99
 Identities = 177/256 (69%), Positives = 217/256 (84%)
 Frame = +1

Query: 1   TMAETILVQARDPSRLSVELENSIVECRFDDSWKLYQQYKEMEGFPRKSILNNLLTGLAE 180
           T+A TILVQARDP++L +E+EN+I E RF+D+WKL++Q+  M+GFPRKSI+N LLT  + 
Sbjct: 43  TLAGTILVQARDPAKLCMEIENAIDEHRFNDAWKLFEQHLHMDGFPRKSIVNKLLTSYSA 102

Query: 181 SGDLQWLEKSHSLVELIFDEDKHELLKFETLIYLSFSLAKYGLPIPASTVLRRMVETEKY 360
           S D+ WLEK++ LVE   +E K  LL+ E LIYLSF LAK GLP+PASTVLR++++ E+Y
Sbjct: 103 SLDVPWLEKAYGLVEQTIEESKQNLLEKEPLIYLSFVLAKCGLPVPASTVLRKLIQMEQY 162

Query: 361 PPVTAWSAIVAHMSRTASGAYLAAELILEIGYLFQDNRVDPRKKTNRPLLSMKPNTTVFN 540
           PPVTAWSAI+AHMS TA GAYLAAELILEIGYLFQD RVDPRKK N PL++MKPNT   N
Sbjct: 163 PPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGRVDPRKKINAPLIAMKPNTIAMN 222

Query: 541 LALAGCLLFGTTRKAEQLLEMMPRVGIKADSNLLITMAHIYEINGHRDELKKLKRHIDDT 720
           +AL GCLLFGTTRKAEQLL+MMPR+GI+AD+NLLI MAHIYE NG R+EL+KL+RHIDD+
Sbjct: 223 IALTGCLLFGTTRKAEQLLDMMPRIGIRADTNLLIIMAHIYERNGRREELRKLQRHIDDS 282

Query: 721 CNLGDLQYQQFYNCLL 768
            +L D Q++QFYNCLL
Sbjct: 283 QSLTDTQFRQFYNCLL 298


>ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Cucumis sativus]
           gi|449503826|ref|XP_004162196.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Cucumis sativus]
          Length = 796

 Score =  353 bits (907), Expect = 2e-95
 Identities = 167/256 (65%), Positives = 216/256 (84%)
 Frame = +1

Query: 1   TMAETILVQARDPSRLSVELENSIVECRFDDSWKLYQQYKEMEGFPRKSILNNLLTGLAE 180
           T++E ILVQARDP++LS++++ +I E R +D+WKLYQQ+ +MEGFPRKS++N LLT  AE
Sbjct: 88  TLSERILVQARDPAKLSMDIQTAIEEQRLNDTWKLYQQHMQMEGFPRKSVVNKLLTCFAE 147

Query: 181 SGDLQWLEKSHSLVELIFDEDKHELLKFETLIYLSFSLAKYGLPIPASTVLRRMVETEKY 360
           + ++QWLEK++ LVE  F E K  LL+ + LIYLS+SLAK GLPIPAST+LR +++ E  
Sbjct: 148 TLEIQWLEKAYDLVEQAFAEGKQNLLEKDPLIYLSYSLAKLGLPIPASTILRNLIKMEHL 207

Query: 361 PPVTAWSAIVAHMSRTASGAYLAAELILEIGYLFQDNRVDPRKKTNRPLLSMKPNTTVFN 540
            PV AWSAI+AHMS+T  GA+LAAELILEIGYLFQD RVDPRKK N PL++MKPN+T FN
Sbjct: 208 LPVAAWSAILAHMSQTGPGAFLAAELILEIGYLFQDGRVDPRKKCNAPLIAMKPNSTAFN 267

Query: 541 LALAGCLLFGTTRKAEQLLEMMPRVGIKADSNLLITMAHIYEINGHRDELKKLKRHIDDT 720
           +AL+GC+LFGTTRKAE+LL+MMPR+G+K D+NLL+ M HIYE NG R+ELKKL+RHID+ 
Sbjct: 268 IALSGCVLFGTTRKAEELLDMMPRIGVKVDTNLLMVMVHIYERNGRREELKKLQRHIDEA 327

Query: 721 CNLGDLQYQQFYNCLL 768
            NL D+Q++QFY+CLL
Sbjct: 328 HNLSDVQFRQFYSCLL 343


>ref|XP_002524751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535935|gb|EEF37594.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 787

 Score =  349 bits (895), Expect = 4e-94
 Identities = 169/256 (66%), Positives = 213/256 (83%)
 Frame = +1

Query: 1   TMAETILVQARDPSRLSVELENSIVECRFDDSWKLYQQYKEMEGFPRKSILNNLLTGLAE 180
           T+A TILVQARDP+RLS  +E++I E R  D+WKL++++ +MEGFP+KS++N LL  +AE
Sbjct: 80  TLAGTILVQARDPARLSAGVEHAINELRLSDAWKLFEKHMQMEGFPQKSVVNKLLASIAE 139

Query: 181 SGDLQWLEKSHSLVELIFDEDKHELLKFETLIYLSFSLAKYGLPIPASTVLRRMVETEKY 360
           S D+ WLEK++ LVE    E K  LL+ +TLI+LSF+LAK GL + ASTVLR+++E E+Y
Sbjct: 140 SNDVPWLEKAYGLVEQAIKESKQNLLEKDTLIFLSFNLAKCGLAVLASTVLRKLIEMEQY 199

Query: 361 PPVTAWSAIVAHMSRTASGAYLAAELILEIGYLFQDNRVDPRKKTNRPLLSMKPNTTVFN 540
           PPVTAWSAI+AHMS TA GAYLAAELILEIGYLFQD +VDPRKK N  L++MKPNTT  N
Sbjct: 200 PPVTAWSAILAHMSLTAPGAYLAAELILEIGYLFQDGKVDPRKKCNATLIAMKPNTTSVN 259

Query: 541 LALAGCLLFGTTRKAEQLLEMMPRVGIKADSNLLITMAHIYEINGHRDELKKLKRHIDDT 720
           +ALAGCL+FGTTRKAEQLL+++PRVGIK ++ LLITMAHIYE NG R EL KL+RHID+ 
Sbjct: 260 IALAGCLVFGTTRKAEQLLDLIPRVGIKVNATLLITMAHIYERNGRRQELMKLQRHIDEA 319

Query: 721 CNLGDLQYQQFYNCLL 768
            ++ D+QY+QFYNCLL
Sbjct: 320 HSISDIQYRQFYNCLL 335