BLASTX nr result

ID: Coptis24_contig00030965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030965
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-57
ref|XP_002527141.1| protein binding protein, putative [Ricinus c...   219   2e-55
ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]              217   9e-55
ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]              216   2e-54
emb|CBI27138.3| unnamed protein product [Vitis vinifera]              209   2e-52

>ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|222856622|gb|EEE94169.1|
            predicted protein [Populus trichocarpa]
          Length = 2870

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/144 (74%), Positives = 119/144 (82%)
 Frame = +2

Query: 2    TDIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQ 181
            TDIP FVSGEN+V+FDPHACNLPGISPSHPGLRIKF GR+ILEQFPDQFSPFLHFGCDLQ
Sbjct: 1507 TDIPTFVSGENVVMFDPHACNLPGISPSHPGLRIKFTGRKILEQFPDQFSPFLHFGCDLQ 1566

Query: 182  RPFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIF 361
             PFPGTLFRFPLRS + A RS IKKE YAPED               LLFLRNVK+IS+F
Sbjct: 1567 HPFPGTLFRFPLRSSTVARRSLIKKEGYAPEDVMSLFTSFSGVVSDALLFLRNVKNISLF 1626

Query: 362  VKDGNGQDMKLLHRVQRHHVTDPE 433
            VK+GNG +M+LLHRVQR+ +T+PE
Sbjct: 1627 VKEGNGSEMQLLHRVQRNCITEPE 1650



 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/142 (39%), Positives = 83/142 (58%)
 Frame = +2

Query: 2   TDIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQ 181
           TD+P+FVSG  IV+FDP    LP ++ S+PG RI FV  + +  + DQF P+  FGCD++
Sbjct: 129 TDLPSFVSGNYIVMFDPQGGYLPNVNSSNPGKRIDFVSTKAMSFYRDQFEPYAVFGCDME 188

Query: 182 RPFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIF 361
             F GTLFRFPLR  + A  S++ ++ Y  +D              +LLFL+NV S+ +F
Sbjct: 189 NRFSGTLFRFPLRDSNQARESKLSRQAYVEDDVILMFEQLYKEGVFSLLFLKNVLSVEMF 248

Query: 362 VKDGNGQDMKLLHRVQRHHVTD 427
           V D      + L+  +  +V+D
Sbjct: 249 VWDEGDVGQRKLYSCRVGNVSD 270


>ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]
            gi|223533501|gb|EEF35243.1| protein binding protein,
            putative [Ricinus communis]
          Length = 4704

 Score =  219 bits (558), Expect = 2e-55
 Identities = 106/144 (73%), Positives = 116/144 (80%)
 Frame = +2

Query: 2    TDIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQ 181
            TDIP FVSGENIV+FDPHACNLPGISPSHPGLRIKF GR+ILEQFPDQFSPFLHFGCDLQ
Sbjct: 1498 TDIPTFVSGENIVMFDPHACNLPGISPSHPGLRIKFAGRKILEQFPDQFSPFLHFGCDLQ 1557

Query: 182  RPFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIF 361
              FPGTLFRFPLRS + A RS+IKKE YAPED               LLFLRNVKSISIF
Sbjct: 1558 HSFPGTLFRFPLRSSAIALRSQIKKEGYAPEDVMSLFESFSGIVSDALLFLRNVKSISIF 1617

Query: 362  VKDGNGQDMKLLHRVQRHHVTDPE 433
            VK+GN  +M+LLHRV R+ + +PE
Sbjct: 1618 VKEGNAYEMQLLHRVHRNCIVEPE 1641



 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/132 (40%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   TDIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQ 181
           TD+P+FVSG+ IV+FDP   +LP +S S+PG RI FV    +  + DQFSP++ FGCD++
Sbjct: 128 TDLPSFVSGKYIVLFDPQGVHLPNVSTSNPGKRIDFVSSSAINFYDDQFSPYIAFGCDMK 187

Query: 182 RPFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIF 361
             F GTLFRFPLR+ + A+ S++ ++ Y  +D              +LLFL++V ++ ++
Sbjct: 188 SSFNGTLFRFPLRNANQAATSKLSRQAYLEDDVLSMFGQLFEEGIFSLLFLKSVLAVEMY 247

Query: 362 VKD-GNGQDMKL 394
           V + G  +  KL
Sbjct: 248 VWEIGESEPRKL 259


>ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4756

 Score =  217 bits (552), Expect = 9e-55
 Identities = 105/144 (72%), Positives = 116/144 (80%)
 Frame = +2

Query: 2    TDIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQ 181
            TDIP FVSGEN+V+FDPHA NLPGISPSHPGLRIKFVG++ILEQFPDQFSP LHFGCDLQ
Sbjct: 1491 TDIPMFVSGENVVMFDPHASNLPGISPSHPGLRIKFVGQQILEQFPDQFSPLLHFGCDLQ 1550

Query: 182  RPFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIF 361
             PFPGTLFRFPLR+   ASRS+IKKE Y PED              TLLFLRNVKSISIF
Sbjct: 1551 HPFPGTLFRFPLRTAGLASRSQIKKEAYTPEDVRSLLAAFSEVVSETLLFLRNVKSISIF 1610

Query: 362  VKDGNGQDMKLLHRVQRHHVTDPE 433
            VK+G GQ+M+LLHRV R  + +PE
Sbjct: 1611 VKEGTGQEMRLLHRVHRTCIGEPE 1634



 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/142 (41%), Positives = 85/142 (59%)
 Frame = +2

Query: 2   TDIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQ 181
           TD+P+FVS + +V+FDP    LP +S ++PG RI F G      + DQFSP+  FGCD+Q
Sbjct: 124 TDLPSFVSHKYVVLFDPQGVYLPRVSAANPGKRIDFTGSSAFSFYRDQFSPYCAFGCDMQ 183

Query: 182 RPFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIF 361
            PF GTLFRFPLR+   A++S++ ++ Y+PED              TLLFL++V  I ++
Sbjct: 184 SPFSGTLFRFPLRNADQAAKSKLSRQAYSPEDISSMFVQLFEEGVLTLLFLKSVLCIEMY 243

Query: 362 VKDGNGQDMKLLHRVQRHHVTD 427
           + D    + K +H      VTD
Sbjct: 244 LWDAGEPEPKKIHSCSVSSVTD 265


>ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4760

 Score =  216 bits (550), Expect = 2e-54
 Identities = 105/144 (72%), Positives = 115/144 (79%)
 Frame = +2

Query: 2    TDIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQ 181
            TDIP FVSGEN+V+FDPHA NLPGISPSHPGLRIKFVGR+ILEQFPDQFSP LHFGCDLQ
Sbjct: 1492 TDIPMFVSGENVVMFDPHASNLPGISPSHPGLRIKFVGRQILEQFPDQFSPLLHFGCDLQ 1551

Query: 182  RPFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIF 361
             PFPGTLFRFPLR+   ASRS+IKKE Y PED              TLLFLRNVKSISIF
Sbjct: 1552 HPFPGTLFRFPLRTAGVASRSQIKKEAYTPEDVRSLFAAFSEVVSETLLFLRNVKSISIF 1611

Query: 362  VKDGNGQDMKLLHRVQRHHVTDPE 433
            VK+G G +M LLHRV+R  + +PE
Sbjct: 1612 VKEGTGHEMHLLHRVRRTCIGEPE 1635



 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/142 (42%), Positives = 86/142 (60%)
 Frame = +2

Query: 2   TDIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQ 181
           TD+P+FVSG+ +V+FDP    LP +S ++PG RI F G   L  + DQFSP+  FGCD+Q
Sbjct: 124 TDLPSFVSGKYVVLFDPQGVYLPRVSAANPGKRIDFTGSSALSFYRDQFSPYCAFGCDMQ 183

Query: 182 RPFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIF 361
            PF GTLFRFPLR+   A+ S++ ++ Y+PED              TLLFL++V  I ++
Sbjct: 184 SPFSGTLFRFPLRNAYQAATSKLSRQAYSPEDISSMFVQLYEEGVLTLLFLKSVLCIEMY 243

Query: 362 VKDGNGQDMKLLHRVQRHHVTD 427
           + D    + K +H      VTD
Sbjct: 244 LWDAGEPEPKKIHSCSVSSVTD 265


>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
          Length = 3960

 Score =  209 bits (532), Expect = 2e-52
 Identities = 100/134 (74%), Positives = 111/134 (82%)
 Frame = +2

Query: 5    DIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQR 184
            DIP FVSGENIV+FDPHACNLPGISPSHPGLRI++VGRRILEQFPDQFSPFLHFGCDLQ 
Sbjct: 998  DIPTFVSGENIVMFDPHACNLPGISPSHPGLRIRYVGRRILEQFPDQFSPFLHFGCDLQN 1057

Query: 185  PFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIFV 364
            PFPGTLFRFPLRS S ASRS+IKKE YAPED               LLF+RNVK+ISIFV
Sbjct: 1058 PFPGTLFRFPLRSASVASRSQIKKEGYAPEDVMSLFASFSEVVSEALLFVRNVKTISIFV 1117

Query: 365  KDGNGQDMKLLHRV 406
            K+  G +M+L+HR+
Sbjct: 1118 KEETGCEMQLIHRI 1131



 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/133 (38%), Positives = 80/133 (60%)
 Frame = +2

Query: 2   TDIPAFVSGENIVIFDPHACNLPGISPSHPGLRIKFVGRRILEQFPDQFSPFLHFGCDLQ 181
           TD+P+FVSG+ +V+FDP    LP +S ++PG RI++V    +  + DQF P+  FGCD++
Sbjct: 131 TDLPSFVSGKYVVLFDPQGVYLPNVSTANPGKRIEYVSSSAISLYKDQFLPYCAFGCDMK 190

Query: 182 RPFPGTLFRFPLRSESAASRSRIKKEKYAPEDXXXXXXXXXXXXXXTLLFLRNVKSISIF 361
            PF GTLFRFPLR+   A+ S++ ++ Y  +D               LLFL++V SI ++
Sbjct: 191 HPFSGTLFRFPLRNADQAAISKLSRQAYLEDDISSMFVQLYEEGVFALLFLKSVLSIEMY 250

Query: 362 VKDGNGQDMKLLH 400
             D    D + ++
Sbjct: 251 TWDAGEPDPRKIY 263


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