BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030960
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ...   247   6e-64
emb|CBI38018.3| unnamed protein product [Vitis vinifera]              237   8e-61
ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|2...   233   9e-60
gb|EEE54765.1| hypothetical protein OsJ_02146 [Oryza sativa Japo...   228   3e-58
gb|EEC70838.1| hypothetical protein OsI_02335 [Oryza sativa Indi...   228   3e-58

>ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera]
          Length = 840

 Score =  247 bits (631), Expect = 6e-64
 Identities = 122/154 (79%), Positives = 133/154 (86%)
 Frame = -1

Query: 464 IKSLFKTYVDCLHLKKNDTSRMDAEDPMEFDDGSGNVDKDTSPEYXXXXXXXXXXXXQPD 285
           +KSLFKTY+DCLHLKK D SRM AEDPME ++GSG  ++DT   Y            QPD
Sbjct: 370 VKSLFKTYIDCLHLKKTDKSRMQAEDPMEVENGSGRNEEDTLLGYEDKVAQLKELSKQPD 429

Query: 284 IYDKLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATFRGDINILLVGDPGTSKSQL 105
           IYD+LTRSLAPNIWELDDVK+GLLCQLFGG+ALKLPSGA+FRGDINILLVGDPGTSKSQL
Sbjct: 430 IYDRLTRSLAPNIWELDDVKKGLLCQLFGGSALKLPSGASFRGDINILLVGDPGTSKSQL 489

Query: 104 LQYIHKLAPRGIYTSGRGSSAVGLTAYVTKDPET 3
           LQYIHKL+PRGIYTSGRGSSAVGLTAYVTKDPET
Sbjct: 490 LQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPET 523


>emb|CBI38018.3| unnamed protein product [Vitis vinifera]
          Length = 834

 Score =  237 bits (604), Expect = 8e-61
 Identities = 117/148 (79%), Positives = 127/148 (85%)
 Frame = -1

Query: 446 TYVDCLHLKKNDTSRMDAEDPMEFDDGSGNVDKDTSPEYXXXXXXXXXXXXQPDIYDKLT 267
           TY+DCLHLKK D SRM AEDPME ++GSG  ++DT   Y            QPDIYD+LT
Sbjct: 370 TYIDCLHLKKTDKSRMQAEDPMEVENGSGRNEEDTLLGYEDKVAQLKELSKQPDIYDRLT 429

Query: 266 RSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATFRGDINILLVGDPGTSKSQLLQYIHK 87
           RSLAPNIWELDDVK+GLLCQLFGG+ALKLPSGA+FRGDINILLVGDPGTSKSQLLQYIHK
Sbjct: 430 RSLAPNIWELDDVKKGLLCQLFGGSALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHK 489

Query: 86  LAPRGIYTSGRGSSAVGLTAYVTKDPET 3
           L+PRGIYTSGRGSSAVGLTAYVTKDPET
Sbjct: 490 LSPRGIYTSGRGSSAVGLTAYVTKDPET 517


>ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|222849431|gb|EEE86978.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  233 bits (595), Expect = 9e-60
 Identities = 119/156 (76%), Positives = 132/156 (84%), Gaps = 2/156 (1%)
 Frame = -1

Query: 464 IKSLFKTYVDCLHLKKNDTSRMDAEDPMEFDDGSGN--VDKDTSPEYXXXXXXXXXXXXQ 291
           +KSLFKTYVDCLH+KK D SRM AEDPM+ D+G+ +  +++D                 Q
Sbjct: 278 VKSLFKTYVDCLHIKKTDKSRMLAEDPMDVDNGNASRRIEED-------FHFDEAKLSRQ 330

Query: 290 PDIYDKLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATFRGDINILLVGDPGTSKS 111
           PDIYD+LTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGA+FRGDINILLVGDPGTSKS
Sbjct: 331 PDIYDRLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKS 390

Query: 110 QLLQYIHKLAPRGIYTSGRGSSAVGLTAYVTKDPET 3
           QLLQYIHKL+PRGIYTSGRGSSAVGLTAYV+KDPET
Sbjct: 391 QLLQYIHKLSPRGIYTSGRGSSAVGLTAYVSKDPET 426


>gb|EEE54765.1| hypothetical protein OsJ_02146 [Oryza sativa Japonica Group]
          Length = 862

 Score =  228 bits (582), Expect = 3e-58
 Identities = 114/155 (73%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
 Frame = -1

Query: 464 IKSLFKTYVDCLHLKKNDTSRMDAEDPMEFDDGSGNVDKDTSPEYXXXXXXXXXXXXQ-P 288
           +KS+FKTY+DCLH+KK D SR+  ED ME D+ + N  K T  ++            + P
Sbjct: 394 VKSIFKTYIDCLHIKKTDKSRLHVEDSMETDNPNAN--KTTEDDFLRDKVEKLKELSKLP 451

Query: 287 DIYDKLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATFRGDINILLVGDPGTSKSQ 108
           DIYD+LTRSLAPNIWELDDVKRGLLCQLFGGNAL+LPSGA+FRGDINILLVGDPGTSKSQ
Sbjct: 452 DIYDRLTRSLAPNIWELDDVKRGLLCQLFGGNALRLPSGASFRGDINILLVGDPGTSKSQ 511

Query: 107 LLQYIHKLAPRGIYTSGRGSSAVGLTAYVTKDPET 3
           LLQY+HKL+PRGIYTSGRGSSAVGLTAYVTKDPET
Sbjct: 512 LLQYMHKLSPRGIYTSGRGSSAVGLTAYVTKDPET 546


>gb|EEC70838.1| hypothetical protein OsI_02335 [Oryza sativa Indica Group]
          Length = 725

 Score =  228 bits (582), Expect = 3e-58
 Identities = 114/155 (73%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
 Frame = -1

Query: 464 IKSLFKTYVDCLHLKKNDTSRMDAEDPMEFDDGSGNVDKDTSPEYXXXXXXXXXXXXQ-P 288
           +KS+FKTY+DCLH+KK D SR+  ED ME D+ + N  K T  ++            + P
Sbjct: 293 VKSIFKTYIDCLHIKKTDKSRLHVEDSMETDNPNAN--KTTEDDFLRDKVEKLKELSKLP 350

Query: 287 DIYDKLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATFRGDINILLVGDPGTSKSQ 108
           DIYD+LTRSLAPNIWELDDVKRGLLCQLFGGNAL+LPSGA+FRGDINILLVGDPGTSKSQ
Sbjct: 351 DIYDRLTRSLAPNIWELDDVKRGLLCQLFGGNALRLPSGASFRGDINILLVGDPGTSKSQ 410

Query: 107 LLQYIHKLAPRGIYTSGRGSSAVGLTAYVTKDPET 3
           LLQY+HKL+PRGIYTSGRGSSAVGLTAYVTKDPET
Sbjct: 411 LLQYMHKLSPRGIYTSGRGSSAVGLTAYVTKDPET 445