BLASTX nr result

ID: Coptis24_contig00030952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030952
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537389.1| PREDICTED: uncharacterized protein LOC100814...    96   3e-18
ref|XP_002267660.1| PREDICTED: cell division cycle-associated 7-...    96   4e-18
ref|XP_003516591.1| PREDICTED: uncharacterized protein LOC100791...    94   1e-17
ref|XP_002880511.1| hypothetical protein ARALYDRAFT_320173 [Arab...    91   7e-17
ref|XP_002281568.1| PREDICTED: uncharacterized protein LOC100265...    90   2e-16

>ref|XP_003537389.1| PREDICTED: uncharacterized protein LOC100814126 [Glycine max]
          Length = 374

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/75 (62%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGHLYSEISKLGFSSVAHYLIQRTERRSDDIATDA---- 169
           CPVCRGICNCSLCR+AKGW  TG LY +IS LG+ SVAHYLIQ T R   D+  +A    
Sbjct: 214 CPVCRGICNCSLCRQAKGWAPTGTLYKKISTLGYKSVAHYLIQ-TRRSEIDVKKNADPSN 272

Query: 170 PVLVKRSLPFADTEE 214
           PV  KRSLPF+D ++
Sbjct: 273 PVSAKRSLPFSDVDK 287


>ref|XP_002267660.1| PREDICTED: cell division cycle-associated 7-like protein-like
           [Vitis vinifera] gi|297745687|emb|CBI40972.3| unnamed
           protein product [Vitis vinifera]
          Length = 438

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/89 (57%), Positives = 58/89 (65%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGHLYSEISKLGFSSVAHYLIQRTERRSDDIATDAPVLV 181
           CPVCRGICNCSLCR AKGWP TG LY +I+KLGF SVAHYLIQ T R   +I  D     
Sbjct: 219 CPVCRGICNCSLCRTAKGWPPTGPLYKKITKLGFRSVAHYLIQ-TRRSQTNIEKDQG--S 275

Query: 182 KRSLPFADTEEVADRKDSLSSDDWQHEIP 268
           +RSLPF D     + K+S   +D   E P
Sbjct: 276 QRSLPFPDMSLPPESKESPEVNDDHIESP 304


>ref|XP_003516591.1| PREDICTED: uncharacterized protein LOC100791534 [Glycine max]
          Length = 372

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/75 (62%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGHLYSEISKLGFSSVAHYLIQRTERRSDDIATDA---- 169
           CPVCRGICNCSLCR+AKGW  TG LY +IS LG+ SVAHYLIQ T R   D   +A    
Sbjct: 212 CPVCRGICNCSLCRQAKGWAPTGPLYKKISALGYKSVAHYLIQ-TRRSEIDEKKNADASD 270

Query: 170 PVLVKRSLPFADTEE 214
           PV  KRSLPF+D ++
Sbjct: 271 PVSAKRSLPFSDVDK 285


>ref|XP_002880511.1| hypothetical protein ARALYDRAFT_320173 [Arabidopsis lyrata subsp.
           lyrata] gi|297326350|gb|EFH56770.1| hypothetical protein
           ARALYDRAFT_320173 [Arabidopsis lyrata subsp. lyrata]
          Length = 566

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 52/124 (41%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGHLYSEISKLGFSSVAHYLIQRTERRSDDIATDAPVLV 181
           CP CRGICNCSLCR  KGW  TG +Y  I+ LG+ SVAHYLIQ    ++ D A +     
Sbjct: 214 CPACRGICNCSLCRNNKGWVPTGPIYRRIAALGYKSVAHYLIQTKRAQTQDAAPN-QASA 272

Query: 182 KRSLPF----ADTEEVADRKDSLSSDDWQHEIPNHGFIDKRGSKLKDEEDNLHNVSNVEE 349
           KRSL F    AD EEV     +L +DD   +  +    + +   L +E   L N+ N   
Sbjct: 273 KRSLSFQGMIADDEEV----PTLENDDSLQKEEDENTNENQNGDLPEEVQKLQNIENQSG 328

Query: 350 DEKK 361
           D  K
Sbjct: 329 DSLK 332


>ref|XP_002281568.1| PREDICTED: uncharacterized protein LOC100265793 [Vitis vinifera]
           gi|297741367|emb|CBI32498.3| unnamed protein product
           [Vitis vinifera]
          Length = 376

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGHLYSEISKLGFSSVAHYLIQRTERRSDDIATDAPVLV 181
           CPVCRGICNCSLCR+AKGW  TG +Y ++S+LGF SVAHYLIQ    ++     DA +LV
Sbjct: 220 CPVCRGICNCSLCRQAKGWMPTGPMYKKVSELGFKSVAHYLIQTRRAKTSSEDPDAEILV 279

Query: 182 KRSLP--FADTEEVADRKDSLSSD 247
               P   ADT   A +  SL +D
Sbjct: 280 SAKTPQSMADTGAHALQIISLDAD 303


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