BLASTX nr result

ID: Coptis24_contig00030935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030935
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO86797.1| cyclin [Camellia sinensis]                              83   3e-14
emb|CBI37831.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002278139.1| PREDICTED: G2/mitotic-specific cyclin-1-like...    80   1e-13
ref|XP_002312806.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
gb|ACI89426.1| cyclin B [Populus tomentosa]                            79   3e-13

>gb|AEO86797.1| cyclin [Camellia sinensis]
          Length = 439

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = -1

Query: 281 QLLECAKRMVTFHQKAGTGKLAGVHKKYSTFKFGYAAKLEPAHFLLGD 138
           QLLEC++ MVTFHQKAGTGKL GVH+KYST K+GYAAK EPA+FLL D
Sbjct: 390 QLLECSRLMVTFHQKAGTGKLTGVHRKYSTSKYGYAAKSEPAYFLLED 437


>emb|CBI37831.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = -1

Query: 281 QLLECAKRMVTFHQKAGTGKLAGVHKKYSTFKFGYAAKLEPAHFLL 144
           QL+EC++ MVTFHQKAGTGKL GVH+KYST KFGYAA+ EPA FLL
Sbjct: 379 QLMECSRMMVTFHQKAGTGKLTGVHRKYSTHKFGYAARSEPAQFLL 424


>ref|XP_002278139.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Vitis vinifera]
          Length = 373

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = -1

Query: 281 QLLECAKRMVTFHQKAGTGKLAGVHKKYSTFKFGYAAKLEPAHFLL 144
           QL+EC++ MVTFHQKAGTGKL GVH+KYST KFGYAA+ EPA FLL
Sbjct: 328 QLMECSRMMVTFHQKAGTGKLTGVHRKYSTHKFGYAARSEPAQFLL 373


>ref|XP_002312806.1| predicted protein [Populus trichocarpa] gi|222849214|gb|EEE86761.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = -1

Query: 281 QLLECAKRMVTFHQKAGTGKLAGVHKKYSTFKFGYAAKLEPAHFLLG 141
           QLLEC++ MV+FHQKAG GKL GVH+KYST KFGYAAK EPA FLLG
Sbjct: 352 QLLECSRMMVSFHQKAGYGKLTGVHRKYSTSKFGYAAKAEPALFLLG 398


>gb|ACI89426.1| cyclin B [Populus tomentosa]
          Length = 399

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = -1

Query: 281 QLLECAKRMVTFHQKAGTGKLAGVHKKYSTFKFGYAAKLEPAHFLLG 141
           QLLEC++ MV+FHQKAG GKL GVH+KYST KFGYAAK EPA FLLG
Sbjct: 352 QLLECSRMMVSFHQKAGYGKLTGVHRKYSTSKFGYAAKAEPALFLLG 398


Top