BLASTX nr result

ID: Coptis24_contig00030924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030924
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_004155706.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    82   4e-14
ref|XP_004142595.1| PREDICTED: uncharacterized protein LOC101209...    82   4e-14
ref|XP_002515683.1| conserved hypothetical protein [Ricinus comm...    81   1e-13

>ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|222858473|gb|EEE96020.1|
           predicted protein [Populus trichocarpa]
          Length = 2414

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = +3

Query: 3   LCSAQGADDVNMFLSSIKDEAFVLSECVDKVGTTEEAVKTLLAYGLKITDKYSFLASEAG 182
           L S+QG D +NMFLS+IKD +FVLSECVDKVG TE+AVK LL+YGL++TD++ F  SEA 
Sbjct: 475 LHSSQGKDGINMFLSNIKDHSFVLSECVDKVGPTEDAVKALLSYGLQVTDQFRFSESEAD 534

Query: 183 ESSKIW 200
           E S+IW
Sbjct: 535 EGSQIW 540


>ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1|
           predicted protein [Populus trichocarpa]
          Length = 2421

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/66 (62%), Positives = 53/66 (80%)
 Frame = +3

Query: 3   LCSAQGADDVNMFLSSIKDEAFVLSECVDKVGTTEEAVKTLLAYGLKITDKYSFLASEAG 182
           L S QG DD+NMFLS IKD +FV+SECVDKVG TE+AVK LL+YGL +TD++ F  S++ 
Sbjct: 484 LHSGQGKDDINMFLSKIKDHSFVISECVDKVGPTEDAVKALLSYGLHVTDQFCFSESKSD 543

Query: 183 ESSKIW 200
           + S+IW
Sbjct: 544 KGSQIW 549


>ref|XP_004155706.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228677 [Cucumis sativus]
          Length = 2405

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/67 (56%), Positives = 52/67 (77%)
 Frame = +3

Query: 3   LCSAQGADDVNMFLSSIKDEAFVLSECVDKVGTTEEAVKTLLAYGLKITDKYSFLASEAG 182
           L S QG +++N +LS IKD+ FVLSEC++KVG TE+ VK +L YGLK+T++Y FL  E  
Sbjct: 483 LHSNQGTNEMNAYLSKIKDQVFVLSECIEKVGPTEDTVKAMLDYGLKLTNRYQFLDVEDL 542

Query: 183 ESSKIWS 203
           ES++IWS
Sbjct: 543 ESNEIWS 549


>ref|XP_004142595.1| PREDICTED: uncharacterized protein LOC101209372 [Cucumis sativus]
          Length = 2405

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/67 (56%), Positives = 52/67 (77%)
 Frame = +3

Query: 3   LCSAQGADDVNMFLSSIKDEAFVLSECVDKVGTTEEAVKTLLAYGLKITDKYSFLASEAG 182
           L S QG +++N +LS IKD+ FVLSEC++KVG TE+ VK +L YGLK+T++Y FL  E  
Sbjct: 483 LHSNQGTNEMNAYLSKIKDQVFVLSECIEKVGPTEDTVKAMLDYGLKLTNRYQFLDVEDL 542

Query: 183 ESSKIWS 203
           ES++IWS
Sbjct: 543 ESNEIWS 549


>ref|XP_002515683.1| conserved hypothetical protein [Ricinus communis]
           gi|223545226|gb|EEF46735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2429

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/64 (57%), Positives = 49/64 (76%)
 Frame = +3

Query: 9   SAQGADDVNMFLSSIKDEAFVLSECVDKVGTTEEAVKTLLAYGLKITDKYSFLASEAGES 188
           S QG +D+N+FLS+IKD  +VLSECV KVG TE+A+K LLAYGL  TD++ F  +E  + 
Sbjct: 492 SCQGVNDINLFLSNIKDHGYVLSECVHKVGPTEDAMKALLAYGLHATDQHRFSVAEDHQR 551

Query: 189 SKIW 200
           S+IW
Sbjct: 552 SEIW 555


Top