BLASTX nr result

ID: Coptis24_contig00030907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030907
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150114.1| PREDICTED: uncharacterized protein LOC101218...    99   5e-19
ref|XP_002284666.1| PREDICTED: uncharacterized protein LOC100259...    98   6e-19
ref|XP_002527791.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
gb|AFK47753.1| unknown [Lotus japonicus]                               95   7e-18
gb|AEJ88254.1| putative NADH dehydrogenase subunit NdhL [Wolffia...    92   4e-17

>ref|XP_004150114.1| PREDICTED: uncharacterized protein LOC101218173 [Cucumis sativus]
           gi|449519300|ref|XP_004166673.1| PREDICTED:
           uncharacterized protein LOC101224267 [Cucumis sativus]
          Length = 201

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = -2

Query: 317 KRMLLEMYLQFMFVFMFFPGILLWAPFVNFRRLPRDPTMKYPWSTPQDPS 168
           +R LLEMYLQFM VF+FFPGILLWAPF+NFR+ PRDP+MKYPWSTPQDPS
Sbjct: 133 RRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 182


>ref|XP_002284666.1| PREDICTED: uncharacterized protein LOC100259429 [Vitis vinifera]
           gi|297737670|emb|CBI26871.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 40/50 (80%), Positives = 48/50 (96%)
 Frame = -2

Query: 317 KRMLLEMYLQFMFVFMFFPGILLWAPFVNFRRLPRDPTMKYPWSTPQDPS 168
           +R LLEMYLQFMFVFMFFPG++LWAPF+NFR+ PRDP+MKYPWSTPQ+P+
Sbjct: 121 ERNLLEMYLQFMFVFMFFPGVMLWAPFLNFRKFPRDPSMKYPWSTPQNPT 170


>ref|XP_002527791.1| conserved hypothetical protein [Ricinus communis]
           gi|223532826|gb|EEF34601.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 39/50 (78%), Positives = 46/50 (92%)
 Frame = -2

Query: 317 KRMLLEMYLQFMFVFMFFPGILLWAPFVNFRRLPRDPTMKYPWSTPQDPS 168
           +R L EMYLQFMF F+FFPGILLWAPF+NFR+ PRDP+MKYPWSTP++PS
Sbjct: 120 RRKLFEMYLQFMFTFIFFPGILLWAPFLNFRKFPRDPSMKYPWSTPENPS 169


>gb|AFK47753.1| unknown [Lotus japonicus]
          Length = 193

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 38/50 (76%), Positives = 46/50 (92%)
 Frame = -2

Query: 317 KRMLLEMYLQFMFVFMFFPGILLWAPFVNFRRLPRDPTMKYPWSTPQDPS 168
           +R L+EMY QFMFVF+FFPG+LLWAPF+NFR+ PRDP+MKYPWS P+DPS
Sbjct: 125 RRNLVEMYFQFMFVFIFFPGVLLWAPFLNFRKFPRDPSMKYPWSIPEDPS 174


>gb|AEJ88254.1| putative NADH dehydrogenase subunit NdhL [Wolffia australiana]
          Length = 193

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = -2

Query: 317 KRMLLEMYLQFMFVFMFFPGILLWAPFVNFRRLPRDPTMKYPWSTPQDPSLTDSQSR 147
           KR   EMYLQFM VF+FFPG+LLWAPF+NFR+ PRDP+MKYPWSTP D ++   + R
Sbjct: 137 KRKFFEMYLQFMLVFIFFPGLLLWAPFLNFRKFPRDPSMKYPWSTPSDLNINSQKFR 193


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