BLASTX nr result

ID: Coptis24_contig00030899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030899
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32364.3| unnamed protein product [Vitis vinifera]              205   3e-51
ref|XP_002272235.1| PREDICTED: basic 7S globulin [Vitis vinifera]     205   3e-51
emb|CAN80378.1| hypothetical protein VITISV_038701 [Vitis vinifera]   205   3e-51
emb|CAN61502.1| hypothetical protein VITISV_011733 [Vitis vinifera]   203   1e-50
ref|XP_002308984.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49

>emb|CBI32364.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  205 bits (522), Expect = 3e-51
 Identities = 100/155 (64%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
 Frame = +3

Query: 6   LSINNDGTGGTKLGTIIPYTTLETSIYNTFTKGFMEVAASLFNMTRVASVAPFEVCFNSE 185
           LSI+++G GGTK+ T+ PYT +ETSIY  FTK F+  AA++ N+TRVA+VAPF VCF+S+
Sbjct: 243 LSIDSEGVGGTKISTVNPYTVMETSIYKAFTKAFISAAAAI-NITRVAAVAPFNVCFSSK 301

Query: 186 NIVNTRSGPIVPTIELVLQSNLVKWRIFGANSMVQVSDDVSCLGFLDGGLNAKTSIIIGG 365
           N+ +TR GP VP+I+LVLQ+  V WRIFGANSMV VSDDV CLGF+DGG N +TSI+IGG
Sbjct: 302 NVYSTRVGPSVPSIDLVLQNESVFWRIFGANSMVYVSDDVLCLGFVDGGANPRTSIVIGG 361

Query: 366 HQMENNVLEFDLANSRMGF-SSLLNRQIECSNFNF 467
           +Q+E+N+L+FDLA SR+GF SSLL R+  C+NFNF
Sbjct: 362 YQLEDNLLQFDLATSRLGFSSSLLFRRTTCANFNF 396


>ref|XP_002272235.1| PREDICTED: basic 7S globulin [Vitis vinifera]
          Length = 436

 Score =  205 bits (522), Expect = 3e-51
 Identities = 100/155 (64%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
 Frame = +3

Query: 6   LSINNDGTGGTKLGTIIPYTTLETSIYNTFTKGFMEVAASLFNMTRVASVAPFEVCFNSE 185
           LSI+++G GGTK+ T+ PYT +ETSIY  FTK F+  AA++ N+TRVA+VAPF VCF+S+
Sbjct: 279 LSIDSEGVGGTKISTVNPYTVMETSIYKAFTKAFISAAAAI-NITRVAAVAPFNVCFSSK 337

Query: 186 NIVNTRSGPIVPTIELVLQSNLVKWRIFGANSMVQVSDDVSCLGFLDGGLNAKTSIIIGG 365
           N+ +TR GP VP+I+LVLQ+  V WRIFGANSMV VSDDV CLGF+DGG N +TSI+IGG
Sbjct: 338 NVYSTRVGPSVPSIDLVLQNESVFWRIFGANSMVYVSDDVLCLGFVDGGANPRTSIVIGG 397

Query: 366 HQMENNVLEFDLANSRMGF-SSLLNRQIECSNFNF 467
           +Q+E+N+L+FDLA SR+GF SSLL R+  C+NFNF
Sbjct: 398 YQLEDNLLQFDLATSRLGFSSSLLFRRTTCANFNF 432


>emb|CAN80378.1| hypothetical protein VITISV_038701 [Vitis vinifera]
          Length = 436

 Score =  205 bits (521), Expect = 3e-51
 Identities = 100/155 (64%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
 Frame = +3

Query: 6   LSINNDGTGGTKLGTIIPYTTLETSIYNTFTKGFMEVAASLFNMTRVASVAPFEVCFNSE 185
           LSI+++G GGTK+ T+ PYT +ETSIY  FTK F+  AA++ N+TRVA+VAPF VCF+S+
Sbjct: 279 LSIDSEGVGGTKISTVNPYTVMETSIYKXFTKAFISAAAAI-NITRVAAVAPFNVCFSSK 337

Query: 186 NIVNTRSGPIVPTIELVLQSNLVKWRIFGANSMVQVSDDVSCLGFLDGGLNAKTSIIIGG 365
           N+ +TR GP VP+I+LVLQ+  V WRIFGANSMV VSDDV CLGF+DGG N +TSI+IGG
Sbjct: 338 NVYSTRVGPSVPSIDLVLQNESVFWRIFGANSMVYVSDDVLCLGFVDGGANPRTSIVIGG 397

Query: 366 HQMENNVLEFDLANSRMGF-SSLLNRQIECSNFNF 467
           +Q+E+N+L+FDLA SR+GF SSLL R+  C+NFNF
Sbjct: 398 YQLEDNLLQFDLATSRLGFSSSLLFRRTTCANFNF 432


>emb|CAN61502.1| hypothetical protein VITISV_011733 [Vitis vinifera]
          Length = 415

 Score =  203 bits (517), Expect = 1e-50
 Identities = 102/155 (65%), Positives = 126/155 (81%), Gaps = 1/155 (0%)
 Frame = +3

Query: 6   LSINNDGTGGTKLGTIIPYTTLETSIYNTFTKGFMEVAASLFNMTRVASVAPFEVCFNSE 185
           LSIN+ G GGTK+ T+ PYT +ETSIY+ FTK F+  AAS+ N+TRVA+VAPF VCF+S+
Sbjct: 259 LSINSKGVGGTKISTVNPYTVMETSIYSAFTKAFISAAASM-NITRVAAVAPFSVCFSSK 317

Query: 186 NIVNTRSGPIVPTIELVLQSNLVKWRIFGANSMVQVSDDVSCLGFLDGGLNAKTSIIIGG 365
           N+ +TR G  VPTI LVLQ+N V WRIFGANSMV V+ DV CLGF+DGG N +TSI+IGG
Sbjct: 318 NVYSTRGGAAVPTIGLVLQNNSVVWRIFGANSMVFVNGDVLCLGFVDGGANPRTSIVIGG 377

Query: 366 HQMENNVLEFDLANSRMGF-SSLLNRQIECSNFNF 467
           +Q+E+N+L+FDLA SR+GF SSLL  Q  CSNFNF
Sbjct: 378 YQLEDNLLQFDLAASRLGFSSSLLFSQTTCSNFNF 412


>ref|XP_002308984.1| predicted protein [Populus trichocarpa] gi|222854960|gb|EEE92507.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  198 bits (504), Expect = 3e-49
 Identities = 101/155 (65%), Positives = 121/155 (78%), Gaps = 1/155 (0%)
 Frame = +3

Query: 6   LSINNDGTGGTKLGTIIPYTTLETSIYNTFTKGFMEVAASLFNMTRVASVAPFEVCFNSE 185
           LSIN +G GGTK+ T+  YT +ET+IYN  T  F+   A   N+ RVASVAPF  CFNS+
Sbjct: 261 LSINREGYGGTKISTVNAYTVMETTIYNAVTDSFVRELAKA-NVPRVASVAPFGACFNSK 319

Query: 186 NIVNTRSGPIVPTIELVLQSNLVKWRIFGANSMVQVSDDVSCLGFLDGGLNAKTSIIIGG 365
           NI +TR GP VP I+LVLQS  V WRIFGANSMVQV DDV CLGF+DGG+N +TSI+IGG
Sbjct: 320 NIGSTRVGPAVPQIDLVLQSKNVYWRIFGANSMVQVKDDVLCLGFVDGGVNPRTSIVIGG 379

Query: 366 HQMENNVLEFDLANSRMGF-SSLLNRQIECSNFNF 467
           HQ+E+N+L+FDLA SR+GF SSLL RQ  C+NFNF
Sbjct: 380 HQLEDNLLQFDLAASRLGFSSSLLFRQTTCANFNF 414


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