BLASTX nr result
ID: Coptis24_contig00030891
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030891 (323 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002509934.1| transcription factor, putative [Ricinus comm... 73 2e-11 ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit... 66 3e-09 ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-... 66 3e-09 emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera] 66 3e-09 dbj|BAA32827.1| 98b [Daucus carota] 66 3e-09 >ref|XP_002509934.1| transcription factor, putative [Ricinus communis] gi|223549833|gb|EEF51321.1| transcription factor, putative [Ricinus communis] Length = 514 Score = 73.2 bits (178), Expect = 2e-11 Identities = 34/53 (64%), Positives = 40/53 (75%) Frame = +3 Query: 3 KNLVQERPEISNATLNALISVKWKELNETEKEIWXXXXXXXXXXYKKEMQEYN 161 KNL QERP I+N+TLNALISVKWKEL+E E++IW YKKEM+EYN Sbjct: 452 KNLAQERPVINNSTLNALISVKWKELSEEERQIWNAKAAEAMEIYKKEMEEYN 504 >ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein 13-like [Cucumis sativus] Length = 500 Score = 65.9 bits (159), Expect = 3e-09 Identities = 28/53 (52%), Positives = 41/53 (77%) Frame = +3 Query: 3 KNLVQERPEISNATLNALISVKWKELNETEKEIWXXXXXXXXXXYKKEMQEYN 161 K++++E+P +SN+T+NALISVKWKEL+E E++IW YKKE++EYN Sbjct: 432 KSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYN 484 >ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-like [Cucumis sativus] Length = 500 Score = 65.9 bits (159), Expect = 3e-09 Identities = 28/53 (52%), Positives = 41/53 (77%) Frame = +3 Query: 3 KNLVQERPEISNATLNALISVKWKELNETEKEIWXXXXXXXXXXYKKEMQEYN 161 K++++E+P +SN+T+NALISVKWKEL+E E++IW YKKE++EYN Sbjct: 432 KSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYN 484 >emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera] Length = 532 Score = 65.9 bits (159), Expect = 3e-09 Identities = 29/53 (54%), Positives = 40/53 (75%) Frame = +3 Query: 3 KNLVQERPEISNATLNALISVKWKELNETEKEIWXXXXXXXXXXYKKEMQEYN 161 ++ +QERP I+N+TLNALISVKWKEL+E E++IW Y+KE++EYN Sbjct: 468 RSFLQERPGINNSTLNALISVKWKELDEQERKIWNDKAKEAMEAYQKELEEYN 520 >dbj|BAA32827.1| 98b [Daucus carota] Length = 502 Score = 65.9 bits (159), Expect = 3e-09 Identities = 29/53 (54%), Positives = 38/53 (71%) Frame = +3 Query: 3 KNLVQERPEISNATLNALISVKWKELNETEKEIWXXXXXXXXXXYKKEMQEYN 161 K + +ERP I+N+TLNALISVKWKE++ EK++W YKKEM+EYN Sbjct: 434 KTISEERPGINNSTLNALISVKWKEISHEEKQLWNEKAAGAMEAYKKEMEEYN 486