BLASTX nr result
ID: Coptis24_contig00030865
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030865 (498 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305323.1| predicted protein [Populus trichocarpa] gi|2... 50 5e-09 emb|CBI22199.3| unnamed protein product [Vitis vinifera] 56 3e-06 emb|CAN60905.1| hypothetical protein VITISV_028449 [Vitis vinifera] 55 6e-06 >ref|XP_002305323.1| predicted protein [Populus trichocarpa] gi|222848287|gb|EEE85834.1| predicted protein [Populus trichocarpa] Length = 1097 Score = 50.1 bits (118), Expect(2) = 5e-09 Identities = 21/32 (65%), Positives = 22/32 (68%) Frame = +2 Query: 398 EICKYFESPRGCARGANCSYAHGEAELKQGMQ 493 EICKYF SPRGC RG C YAH E E +Q Q Sbjct: 569 EICKYFHSPRGCVRGTKCFYAHSEEERQQVKQ 600 Score = 35.0 bits (79), Expect(2) = 5e-09 Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 2/40 (5%) Frame = +1 Query: 178 KQRSVDLAKSQDMQFLLNQ-DVSLW-SQPTQLKESRFWLK 291 KQR VDLA+SQDM+F+LN DV+L ++P Q K + WL+ Sbjct: 499 KQRPVDLAESQDMRFMLNNADVNLTVNRPIQQKYTA-WLQ 537 >emb|CBI22199.3| unnamed protein product [Vitis vinifera] Length = 849 Score = 55.8 bits (133), Expect = 3e-06 Identities = 24/39 (61%), Positives = 28/39 (71%) Frame = +2 Query: 368 PAKLSPKAKTEICKYFESPRGCARGANCSYAHGEAELKQ 484 P + AKT IC+YFESP GC RGA C YAHGE EL++ Sbjct: 297 PERTCSIAKTGICRYFESPGGCVRGAKCFYAHGEDELRR 335 >emb|CAN60905.1| hypothetical protein VITISV_028449 [Vitis vinifera] Length = 1609 Score = 55.1 bits (131), Expect = 6e-06 Identities = 23/32 (71%), Positives = 26/32 (81%) Frame = +2 Query: 389 AKTEICKYFESPRGCARGANCSYAHGEAELKQ 484 AKT IC+YFESP GC RGA C YAHGE EL++ Sbjct: 1054 AKTGICRYFESPGGCVRGAKCFYAHGEDELRR 1085