BLASTX nr result

ID: Coptis24_contig00030865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030865
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305323.1| predicted protein [Populus trichocarpa] gi|2...    50   5e-09
emb|CBI22199.3| unnamed protein product [Vitis vinifera]               56   3e-06
emb|CAN60905.1| hypothetical protein VITISV_028449 [Vitis vinifera]    55   6e-06

>ref|XP_002305323.1| predicted protein [Populus trichocarpa] gi|222848287|gb|EEE85834.1|
           predicted protein [Populus trichocarpa]
          Length = 1097

 Score = 50.1 bits (118), Expect(2) = 5e-09
 Identities = 21/32 (65%), Positives = 22/32 (68%)
 Frame = +2

Query: 398 EICKYFESPRGCARGANCSYAHGEAELKQGMQ 493
           EICKYF SPRGC RG  C YAH E E +Q  Q
Sbjct: 569 EICKYFHSPRGCVRGTKCFYAHSEEERQQVKQ 600



 Score = 35.0 bits (79), Expect(2) = 5e-09
 Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
 Frame = +1

Query: 178 KQRSVDLAKSQDMQFLLNQ-DVSLW-SQPTQLKESRFWLK 291
           KQR VDLA+SQDM+F+LN  DV+L  ++P Q K +  WL+
Sbjct: 499 KQRPVDLAESQDMRFMLNNADVNLTVNRPIQQKYTA-WLQ 537


>emb|CBI22199.3| unnamed protein product [Vitis vinifera]
          Length = 849

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +2

Query: 368 PAKLSPKAKTEICKYFESPRGCARGANCSYAHGEAELKQ 484
           P +    AKT IC+YFESP GC RGA C YAHGE EL++
Sbjct: 297 PERTCSIAKTGICRYFESPGGCVRGAKCFYAHGEDELRR 335


>emb|CAN60905.1| hypothetical protein VITISV_028449 [Vitis vinifera]
          Length = 1609

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +2

Query: 389  AKTEICKYFESPRGCARGANCSYAHGEAELKQ 484
            AKT IC+YFESP GC RGA C YAHGE EL++
Sbjct: 1054 AKTGICRYFESPGGCVRGAKCFYAHGEDELRR 1085


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