BLASTX nr result
ID: Coptis24_contig00030861
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00030861
(665 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18266.3| unnamed protein product [Vitis vinifera] 343 2e-92
gb|AFL55357.1| Fanconia anemia complementation group M-like prot... 327 1e-87
ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis ... 320 2e-85
ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-l... 310 1e-82
ref|XP_003576233.1| PREDICTED: uncharacterized protein LOC100835... 255 6e-66
>emb|CBI18266.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 343 bits (879), Expect = 2e-92
Identities = 170/231 (73%), Positives = 196/231 (84%), Gaps = 10/231 (4%)
Frame = +1
Query: 1 KATEFIGQSSGKALKGQTQKIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFDS 180
KAT+FIGQSSGKA KGQ+QK+QQAVL+KFRAGG+N+IVATSIGEEGLDIMEVDLVICFD+
Sbjct: 555 KATQFIGQSSGKASKGQSQKVQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDA 614
Query: 181 NVSPLRMIQRMGRTGRKHDGRV---------VVLACEGSELKGYLRKQANSKAVNKHMHN 333
N+SPLRMIQRMGRTGRKHDGRV +VLACEGSE+KGY+RKQANSK V KHM N
Sbjct: 615 NISPLRMIQRMGRTGRKHDGRVDILLSFMLLLVLACEGSEMKGYMRKQANSKTVRKHMRN 674
Query: 334 GGMNSFDFHSSPRMIPHICKPEVQFVEFSIEQFVPRGKKVKDD-SFDDQAFKNKLSDAET 510
GGMNSF+FHSSPRMIPHI KPEVQFVE SIEQFVPRG+K KDD +KL++ ET
Sbjct: 675 GGMNSFNFHSSPRMIPHIFKPEVQFVELSIEQFVPRGRKGKDDHPIQAPISTDKLTNVET 734
Query: 511 ELIAKYFSSSGEYTWKPSLIAFPHFQAFPSRVHNVMHSFKTRMLIGTMQHL 663
E++AKYF ++G+ TW+PSLIAFP FQAFP+ VH + HSF+T +LI MQHL
Sbjct: 735 EVLAKYFGTTGKITWRPSLIAFPPFQAFPTGVHKIPHSFRTEILIDMMQHL 785
>gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
thaliana]
Length = 1344
Score = 327 bits (838), Expect = 1e-87
Identities = 161/222 (72%), Positives = 191/222 (86%), Gaps = 1/222 (0%)
Frame = +1
Query: 1 KATEFIGQSSGKALKGQTQKIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFDS 180
KATEFIGQSSGK LKGQ+QKIQQAVL+KFRAGG+N+IVATSIGEEGLDIMEVDLVICFD+
Sbjct: 497 KATEFIGQSSGKTLKGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDA 556
Query: 181 NVSPLRMIQRMGRTGRKHDGRVVVLACEGSELKGYLRKQANSKAVNKHMHNGGMNSFDFH 360
NVSPLRMIQRMGRTGRK++GRVVVLACEGSE Y+RKQA+ +A+ KHM NGG NSF+FH
Sbjct: 557 NVSPLRMIQRMGRTGRKNNGRVVVLACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNFH 616
Query: 361 SSPRMIPHICKPEVQFVEFSIEQFVPRGKKVKDD-SFDDQAFKNKLSDAETELIAKYFSS 537
SPRMIPH+ KPEVQ VEFSI+QFVPRGKK++++ + + AF+ KL+ AET ++AKY+++
Sbjct: 617 PSPRMIPHVYKPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQKKLTPAETHMLAKYYNN 676
Query: 538 SGEYTWKPSLIAFPHFQAFPSRVHNVMHSFKTRMLIGTMQHL 663
E + SLIAFPHFQ PS+VH VMHS +T MLI MQHL
Sbjct: 677 PDEEKLRVSLIAFPHFQTLPSKVHKVMHSRQTGMLIDAMQHL 718
>ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis thaliana]
gi|332193686|gb|AEE31807.1| fanconi anemia group M
protein [Arabidopsis thaliana]
Length = 1390
Score = 320 bits (820), Expect = 2e-85
Identities = 159/223 (71%), Positives = 191/223 (85%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 KATEFIGQSSGKALKGQTQKIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFDS 180
KATEFIGQSSGK LKGQ+QKIQQAVL+KFRAGG+N+IVATSIGEEGLDIMEVDLVICFD+
Sbjct: 495 KATEFIGQSSGKTLKGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDA 554
Query: 181 NVSPLRMIQRMGRTGRKHDGR-VVVLACEGSELKGYLRKQANSKAVNKHMHNGGMNSFDF 357
NVSPLRMIQRMGRTGRK++GR ++VLACEGSE Y+RKQA+ +A+ KHM NGG NSF+F
Sbjct: 555 NVSPLRMIQRMGRTGRKNNGRPLLVLACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNF 614
Query: 358 HSSPRMIPHICKPEVQFVEFSIEQFVPRGKKVKDD-SFDDQAFKNKLSDAETELIAKYFS 534
H SPRMIPH+ KPEVQ VEFSI+QFVPRGKK++++ + + AF+ KL+ AET ++AKY++
Sbjct: 615 HPSPRMIPHVYKPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQKKLTPAETHMLAKYYN 674
Query: 535 SSGEYTWKPSLIAFPHFQAFPSRVHNVMHSFKTRMLIGTMQHL 663
+ E + SLIAFPHFQ PS+VH VMHS +T MLI MQHL
Sbjct: 675 NPDEEKLRVSLIAFPHFQTLPSKVHKVMHSRQTGMLIDAMQHL 717
>ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-like [Glycine max]
Length = 1262
Score = 310 bits (795), Expect = 1e-82
Identities = 156/222 (70%), Positives = 181/222 (81%), Gaps = 1/222 (0%)
Frame = +1
Query: 1 KATEFIGQSSGKALKGQTQKIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFDS 180
KATEFIGQSSGKA+KGQ+QK+QQAVL+KFR+G YN+IVATSIGEEGLDIMEVDLVI FD+
Sbjct: 479 KATEFIGQSSGKAMKGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDA 538
Query: 181 NVSPLRMIQRMGRTGRKHDGR-VVVLACEGSELKGYLRKQANSKAVNKHMHNGGMNSFDF 357
N+SPLRMIQRMGRTGRKHDGR ++V ACEG+ELKGYL+KQA SK ++KHM NGG+NSF F
Sbjct: 539 NISPLRMIQRMGRTGRKHDGRSLLVFACEGTELKGYLQKQAKSKTISKHMRNGGINSFTF 598
Query: 358 HSSPRMIPHICKPEVQFVEFSIEQFVPRGKKVKDDSFDDQAFKNKLSDAETELIAKYFSS 537
H SPRMIPH+ KPEV+ VE SIE+F+PR K VKDD K+KL+ AE +L+ YF
Sbjct: 599 HPSPRMIPHVLKPEVKCVELSIEKFIPRPKNVKDDELHISPSKDKLTVAEIDLLETYFHP 658
Query: 538 SGEYTWKPSLIAFPHFQAFPSRVHNVMHSFKTRMLIGTMQHL 663
+ E + SLIAFPHFQ FPSRVH V HS T MLI MQ L
Sbjct: 659 TVENNSRMSLIAFPHFQTFPSRVHKVKHSSGTLMLIDMMQRL 700
>ref|XP_003576233.1| PREDICTED: uncharacterized protein LOC100835661 [Brachypodium
distachyon]
Length = 1395
Score = 255 bits (651), Expect = 6e-66
Identities = 130/223 (58%), Positives = 170/223 (76%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 KATEFIGQSS-GKALKGQTQKIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFD 177
+ +FIGQ+S G LKGQTQK+QQA+LQKFR+G YNI+VATSIGEEGLDIMEVDLVICFD
Sbjct: 553 RPAQFIGQTSTGDRLKGQTQKMQQAILQKFRSGEYNILVATSIGEEGLDIMEVDLVICFD 612
Query: 178 SNVSPLRMIQRMGRTGRKHDGRVVVLACEGSELKGYLRKQANSKAVNKHMHNGGMNSFDF 357
+NVSPLRMIQRMGRTGRKH+GRV +L+ + EL+GY RKQ +++ + + + FD+
Sbjct: 613 ANVSPLRMIQRMGRTGRKHEGRVDILSWQ--ELQGYTRKQGSTRTMKNLLRK--RDKFDY 668
Query: 358 HSSPRMIPHICKPEVQFVEFSIEQFVPRGKKVKDDSFDDQAFKNKLSDAETELIAKYFSS 537
H+SPRM+PH+ KPEV++V+ SIE++VP KK+K D+ NKLS+ + +LIA+YF +
Sbjct: 669 HASPRMVPHVYKPEVKYVKLSIEKYVPHSKKIKVDASCVSPILNKLSEEDGQLIARYFIA 728
Query: 538 SGEYTWKPSLIAFPHFQAFPSRVHNVMHSFKTR-MLIGTMQHL 663
E WKPSL+AFP FQ P ++ V HSF+T ML+ MQ L
Sbjct: 729 CKEDIWKPSLVAFPSFQVSPCDIYKVPHSFRTTDMLVDAMQQL 771