BLASTX nr result

ID: Coptis24_contig00030852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030852
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26155.3| unnamed protein product [Vitis vinifera]              143   2e-32
ref|XP_002277316.1| PREDICTED: S-adenosylmethionine decarboxylas...   143   2e-32
emb|CAN76568.1| hypothetical protein VITISV_030214 [Vitis vinifera]   141   6e-32
ref|XP_003528663.1| PREDICTED: S-adenosylmethionine decarboxylas...   133   1e-29
ref|XP_002314430.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29

>emb|CBI26155.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/83 (84%), Positives = 75/83 (90%)
 Frame = +1

Query: 28  MAQSGFEGFEKRLEMHFSCDDPVIGLGLRRLKFESLEEILDAVQCTVVSAVGNQYVDAYV 207
           MA SGFEGFEKRLE+HFS DDPV+G+GLR L FESLE++L AVQCTVVSAVGN Y DAYV
Sbjct: 1   MAVSGFEGFEKRLELHFSGDDPVVGMGLRHLDFESLEQVLHAVQCTVVSAVGNHYFDAYV 60

Query: 208 LSESSLFVYPTMIIIKTCGTTQL 276
           LSESSLFVYPT IIIKTCGTTQL
Sbjct: 61  LSESSLFVYPTKIIIKTCGTTQL 83


>ref|XP_002277316.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Vitis
           vinifera]
          Length = 350

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/83 (84%), Positives = 75/83 (90%)
 Frame = +1

Query: 28  MAQSGFEGFEKRLEMHFSCDDPVIGLGLRRLKFESLEEILDAVQCTVVSAVGNQYVDAYV 207
           MA SGFEGFEKRLE+HFS DDPV+G+GLR L FESLE++L AVQCTVVSAVGN Y DAYV
Sbjct: 1   MAVSGFEGFEKRLELHFSGDDPVVGMGLRHLDFESLEQVLHAVQCTVVSAVGNHYFDAYV 60

Query: 208 LSESSLFVYPTMIIIKTCGTTQL 276
           LSESSLFVYPT IIIKTCGTTQL
Sbjct: 61  LSESSLFVYPTKIIIKTCGTTQL 83


>emb|CAN76568.1| hypothetical protein VITISV_030214 [Vitis vinifera]
          Length = 350

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/83 (83%), Positives = 74/83 (89%)
 Frame = +1

Query: 28  MAQSGFEGFEKRLEMHFSCDDPVIGLGLRRLKFESLEEILDAVQCTVVSAVGNQYVDAYV 207
           MA SGFEGFEKRLE+HFS DDPV+G+GLR L FESLE++L AVQCTVVSAVGN Y DAYV
Sbjct: 1   MAVSGFEGFEKRLELHFSGDDPVVGMGLRHLDFESLEQVLHAVQCTVVSAVGNHYFDAYV 60

Query: 208 LSESSLFVYPTMIIIKTCGTTQL 276
           LSESSLF YPT IIIKTCGTTQL
Sbjct: 61  LSESSLFXYPTKIIIKTCGTTQL 83


>ref|XP_003528663.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like
           [Glycine max]
          Length = 346

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/84 (79%), Positives = 75/84 (89%), Gaps = 1/84 (1%)
 Frame = +1

Query: 28  MAQSGFEGFEKRLEMHFSCDDPVI-GLGLRRLKFESLEEILDAVQCTVVSAVGNQYVDAY 204
           MA SGFEGFEKRLE+HF  DDP +  LG+R+L+FESLE++L+AVQCTVVSAVGN Y DAY
Sbjct: 1   MAVSGFEGFEKRLELHFFGDDPAMFPLGIRKLEFESLEQVLEAVQCTVVSAVGNSYFDAY 60

Query: 205 VLSESSLFVYPTMIIIKTCGTTQL 276
           VLSESSLFVYPT IIIKTCGTTQL
Sbjct: 61  VLSESSLFVYPTKIIIKTCGTTQL 84


>ref|XP_002314430.1| predicted protein [Populus trichocarpa] gi|222863470|gb|EEF00601.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/88 (77%), Positives = 75/88 (85%), Gaps = 3/88 (3%)
 Frame = +1

Query: 22  LSMAQSGFEGFEKRLEMHFSCDDPVI---GLGLRRLKFESLEEILDAVQCTVVSAVGNQY 192
           +SMA SGFEG+EKRLE+HF  DDP +    LGLR L FESLE++L+AVQCTVVSAV NQY
Sbjct: 1   ISMAMSGFEGYEKRLELHFFGDDPAMLDNNLGLRLLDFESLEQVLNAVQCTVVSAVANQY 60

Query: 193 VDAYVLSESSLFVYPTMIIIKTCGTTQL 276
            DAYVLSESSLFVYPT IIIKTCGTTQL
Sbjct: 61  FDAYVLSESSLFVYPTKIIIKTCGTTQL 88


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