BLASTX nr result

ID: Coptis24_contig00030837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030837
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310803.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_003611990.1| hypothetical protein MTR_5g020090 [Medicago ...    67   2e-09
ref|XP_003611992.1| hypothetical protein MTR_5g020110 [Medicago ...    65   4e-09

>ref|XP_002310803.1| predicted protein [Populus trichocarpa] gi|222853706|gb|EEE91253.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 55/117 (47%), Positives = 72/117 (61%)
 Frame = +1

Query: 76  VSRSFRLQRRSSIKLGRSNSPALLSESISPESARFTKYERLFQSMRLPDEWNQDQLRRQK 255
           V RSFR++R SSIK GRSNS  L+SESIS E  R  +YE L  SMR+ ++  QD   R +
Sbjct: 4   VCRSFRVERGSSIKFGRSNSSLLISESISSECTRVARYENLSASMRMSND--QDIGYRSR 61

Query: 256 KKKAFYLLNRIFSRNGRQSGRTAENKGQGLRSQKEENKRKSWLSSWLPDPNHRWPVQ 426
           K +A+  ++++FS   R+     E + Q     +EE K K   SSWLPDP  RWPVQ
Sbjct: 62  KSRAYTFISKVFS--FRKISSDCETRQQADMVTQEEKKEKKKRSSWLPDPERRWPVQ 116


>ref|XP_003611990.1| hypothetical protein MTR_5g020090 [Medicago truncatula]
           gi|355513325|gb|AES94948.1| hypothetical protein
           MTR_5g020090 [Medicago truncatula]
          Length = 102

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/106 (39%), Positives = 59/106 (55%)
 Frame = +1

Query: 109 SIKLGRSNSPALLSESISPESARFTKYERLFQSMRLPDEWNQDQLRRQKKKKAFYLLNRI 288
           S +L RS    L SESI+ E A+ + YERL QSMRL +E+       +K K+    + ++
Sbjct: 6   SFRLSRSERILLSSESITSECAKISGYERLSQSMRLSEEY-----EHKKNKRGIGFITKV 60

Query: 289 FSRNGRQSGRTAENKGQGLRSQKEENKRKSWLSSWLPDPNHRWPVQ 426
            S   R S     N    L ++KE+ +     SSWLPDPN+RWP+Q
Sbjct: 61  LSFR-RISTPHEGNVAVELAAKKEKKR-----SSWLPDPNNRWPIQ 100


>ref|XP_003611992.1| hypothetical protein MTR_5g020110 [Medicago truncatula]
           gi|355513327|gb|AES94950.1| hypothetical protein
           MTR_5g020110 [Medicago truncatula]
          Length = 96

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/111 (36%), Positives = 59/111 (53%)
 Frame = +1

Query: 94  LQRRSSIKLGRSNSPALLSESISPESARFTKYERLFQSMRLPDEWNQDQLRRQKKKKAFY 273
           ++ R S++L RS    L SES++ E A+   YERL Q+M + +E+       +K K+   
Sbjct: 1   MEFRKSVRLSRSEGILLSSESVTSECAKVGGYERLSQTMEINEEY-----EHKKNKRGIG 55

Query: 274 LLNRIFSRNGRQSGRTAENKGQGLRSQKEENKRKSWLSSWLPDPNHRWPVQ 426
            LN++ +     S   A        ++K+E KR    SSWLPDP  RWPVQ
Sbjct: 56  FLNKVLNLTRISSPHEA--------AEKKEKKR----SSWLPDPQKRWPVQ 94


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