BLASTX nr result

ID: Coptis24_contig00030836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030836
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18999.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002285867.2| PREDICTED: aspartic proteinase Asp1-like [Vi...   100   9e-20
ref|XP_003545645.1| PREDICTED: aspartic proteinase Asp1-like [Gl...   100   2e-19
ref|XP_003519007.1| PREDICTED: LOW QUALITY PROTEIN: aspartic pro...    99   4e-19
ref|XP_002310541.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>emb|CBI18999.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = +2

Query: 2   MIITSHGNVCLGILNGSEVGLEDLNIIGDISLQDLLVIYDNEKQQIGWVPKDCTRLPKS 178
           +II+ HGN CLGILNGSEVGL D N+IGDI+ QD +VIYDNE+QQIGWVPKDC +LPKS
Sbjct: 332 LIISKHGNACLGILNGSEVGLGDSNVIGDIAFQDKMVIYDNERQQIGWVPKDCNKLPKS 390


>ref|XP_002285867.2| PREDICTED: aspartic proteinase Asp1-like [Vitis vinifera]
          Length = 453

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = +2

Query: 2   MIITSHGNVCLGILNGSEVGLEDLNIIGDISLQDLLVIYDNEKQQIGWVPKDCTRLPK 175
           +II+ HGN CLGILNGSEVGL D N+IGDI+ QD +VIYDNE+QQIGWVPKDC +LPK
Sbjct: 365 LIISKHGNACLGILNGSEVGLGDSNVIGDIAFQDKMVIYDNERQQIGWVPKDCNKLPK 422


>ref|XP_003545645.1| PREDICTED: aspartic proteinase Asp1-like [Glycine max]
          Length = 452

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = +2

Query: 2   MIITSHGNVCLGILNGSEVGLEDLNIIGDISLQDLLVIYDNEKQQIGWVPKDCTRLP 172
           +IIT HGNVCLGIL+G+EVGLE+LNIIGDISLQD +VIYDNEKQQIGWV  +C RLP
Sbjct: 363 LIITKHGNVCLGILDGTEVGLENLNIIGDISLQDKMVIYDNEKQQIGWVSSNCDRLP 419


>ref|XP_003519007.1| PREDICTED: LOW QUALITY PROTEIN: aspartic proteinase Asp1-like
           [Glycine max]
          Length = 454

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/57 (78%), Positives = 52/57 (91%)
 Frame = +2

Query: 2   MIITSHGNVCLGILNGSEVGLEDLNIIGDISLQDLLVIYDNEKQQIGWVPKDCTRLP 172
           +IIT HGNVCLGIL+G+EVGLE+LNIIGDI+LQD +VIYDNEKQQIGWV  +C RLP
Sbjct: 363 LIITKHGNVCLGILDGTEVGLENLNIIGDITLQDKMVIYDNEKQQIGWVSSNCDRLP 419


>ref|XP_002310541.1| predicted protein [Populus trichocarpa] gi|222853444|gb|EEE90991.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 42/63 (66%), Positives = 54/63 (85%)
 Frame = +2

Query: 2   MIITSHGNVCLGILNGSEVGLEDLNIIGDISLQDLLVIYDNEKQQIGWVPKDCTRLPKSG 181
           +I++S GN CLG+LNG+EVGL DLN+IGDIS+QD +VIYDNEKQ IGW P++C R+PKS 
Sbjct: 317 LIVSSKGNACLGVLNGTEVGLNDLNVIGDISMQDRVVIYDNEKQLIGWAPRNCDRIPKSR 376

Query: 182 SAL 190
           S +
Sbjct: 377 SII 379


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