BLASTX nr result

ID: Coptis24_contig00030827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030827
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278916.2| PREDICTED: uncharacterized protein LOC100250...   117   1e-24
ref|XP_002318511.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_004170831.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   113   2e-23
ref|XP_004137356.1| PREDICTED: uncharacterized protein LOC101203...   113   2e-23
ref|XP_003631131.1| hypothetical protein MTR_8g107440 [Medicago ...   113   2e-23

>ref|XP_002278916.2| PREDICTED: uncharacterized protein LOC100250985 [Vitis vinifera]
          Length = 1089

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/82 (73%), Positives = 65/82 (79%)
 Frame = -3

Query: 246 MAIVTGDRYLEYLVKFVEKEAGPLLESTLILKLNPVGLHYVXXXXXXXXXXXXXLVNAPV 67
           MAIVTGDRYLE LVKFVEK+AGPL+E +++LKLNPVGLHYV             L  APV
Sbjct: 1   MAIVTGDRYLESLVKFVEKQAGPLIEGSVVLKLNPVGLHYVQSRLEALHELESLLAGAPV 60

Query: 66  DYLRAYISDLGDHRALEQLRRI 1
           DYLRAYISDLGDHRALEQLRRI
Sbjct: 61  DYLRAYISDLGDHRALEQLRRI 82


>ref|XP_002318511.1| predicted protein [Populus trichocarpa] gi|222859184|gb|EEE96731.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/82 (70%), Positives = 64/82 (78%)
 Frame = -3

Query: 246 MAIVTGDRYLEYLVKFVEKEAGPLLESTLILKLNPVGLHYVXXXXXXXXXXXXXLVNAPV 67
           MAIVTGDRYLE LVKFVE++AGPL++ TL+LKLNP GLHYV             L  APV
Sbjct: 54  MAIVTGDRYLEKLVKFVEEQAGPLIDGTLVLKLNPAGLHYVNSRLESLHELENLLSGAPV 113

Query: 66  DYLRAYISDLGDHRALEQLRRI 1
           DYLRAY+SDLGDHRALEQLRRI
Sbjct: 114 DYLRAYVSDLGDHRALEQLRRI 135


>ref|XP_004170831.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228525 [Cucumis sativus]
          Length = 977

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/82 (70%), Positives = 62/82 (75%)
 Frame = -3

Query: 246 MAIVTGDRYLEYLVKFVEKEAGPLLESTLILKLNPVGLHYVXXXXXXXXXXXXXLVNAPV 67
           MAIVTGDRYLE LVKFVE+ A PL+E TL+LKLNP GLHYV             L  APV
Sbjct: 1   MAIVTGDRYLEKLVKFVEERADPLIEGTLVLKLNPAGLHYVQSRLEALHELESLLTGAPV 60

Query: 66  DYLRAYISDLGDHRALEQLRRI 1
           DYLRAY+SDLGDHRALEQLRRI
Sbjct: 61  DYLRAYVSDLGDHRALEQLRRI 82


>ref|XP_004137356.1| PREDICTED: uncharacterized protein LOC101203626 [Cucumis sativus]
          Length = 1090

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/82 (70%), Positives = 62/82 (75%)
 Frame = -3

Query: 246 MAIVTGDRYLEYLVKFVEKEAGPLLESTLILKLNPVGLHYVXXXXXXXXXXXXXLVNAPV 67
           MAIVTGDRYLE LVKFVE+ A PL+E TL+LKLNP GLHYV             L  APV
Sbjct: 1   MAIVTGDRYLEKLVKFVEERADPLIEGTLVLKLNPAGLHYVQSRLEALHELESLLTGAPV 60

Query: 66  DYLRAYISDLGDHRALEQLRRI 1
           DYLRAY+SDLGDHRALEQLRRI
Sbjct: 61  DYLRAYVSDLGDHRALEQLRRI 82


>ref|XP_003631131.1| hypothetical protein MTR_8g107440 [Medicago truncatula]
           gi|355525153|gb|AET05607.1| hypothetical protein
           MTR_8g107440 [Medicago truncatula]
          Length = 1238

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/82 (69%), Positives = 63/82 (76%)
 Frame = -3

Query: 246 MAIVTGDRYLEYLVKFVEKEAGPLLESTLILKLNPVGLHYVXXXXXXXXXXXXXLVNAPV 67
           MAIVTGDRYLE LVKFVE +AGPL+E + +LKLNP GLHYV             L+ APV
Sbjct: 1   MAIVTGDRYLEKLVKFVEDQAGPLIEGSFVLKLNPAGLHYVQSRLESLHELESLLLGAPV 60

Query: 66  DYLRAYISDLGDHRALEQLRRI 1
           DYLRAY+SDLGDHRALEQLRRI
Sbjct: 61  DYLRAYVSDLGDHRALEQLRRI 82


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