BLASTX nr result

ID: Coptis24_contig00030818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030818
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260...   106   2e-21
emb|CBI25071.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|NP_201256.2| uncharacterized protein [Arabidopsis thaliana] ...   105   4e-21
ref|XP_002864906.1| predicted protein [Arabidopsis lyrata subsp....   104   8e-21

>ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260026 [Vitis vinifera]
          Length = 444

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/62 (77%), Positives = 58/62 (93%)
 Frame = +2

Query: 200 KPISDLKDAIVKGLGFEIEDVKISGFDIRDALVGRSVAYEFDIEVDNKVMPLKLLEDVSR 379
           K  SDLKDAIVKGLGF+ ED+K+SGFD+RDALVG SVAYEF++E+DNKV+P+KLLEDV+R
Sbjct: 35  KAFSDLKDAIVKGLGFQSEDLKVSGFDLRDALVGHSVAYEFNVEIDNKVLPIKLLEDVNR 94

Query: 380 WE 385
           WE
Sbjct: 95  WE 96


>emb|CBI25071.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/62 (77%), Positives = 58/62 (93%)
 Frame = +2

Query: 200 KPISDLKDAIVKGLGFEIEDVKISGFDIRDALVGRSVAYEFDIEVDNKVMPLKLLEDVSR 379
           K  SDLKDAIVKGLGF+ ED+K+SGFD+RDALVG SVAYEF++E+DNKV+P+KLLEDV+R
Sbjct: 91  KAFSDLKDAIVKGLGFQSEDLKVSGFDLRDALVGHSVAYEFNVEIDNKVLPIKLLEDVNR 150

Query: 380 WE 385
           WE
Sbjct: 151 WE 152


>ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|222850354|gb|EEE87901.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/68 (73%), Positives = 59/68 (86%)
 Frame = +2

Query: 182 NALTNSKPISDLKDAIVKGLGFEIEDVKISGFDIRDALVGRSVAYEFDIEVDNKVMPLKL 361
           N+  + K ISDLK+AIVKGLGF+ ++ KISGFD+RDALVG SVAYEFD+EVDNKV P KL
Sbjct: 33  NSPPHPKAISDLKEAIVKGLGFQADEFKISGFDLRDALVGHSVAYEFDVEVDNKVFPFKL 92

Query: 362 LEDVSRWE 385
           LEDV+RWE
Sbjct: 93  LEDVNRWE 100


>ref|NP_201256.2| uncharacterized protein [Arabidopsis thaliana]
           gi|28393303|gb|AAO42078.1| unknown protein [Arabidopsis
           thaliana] gi|28827700|gb|AAO50694.1| unknown protein
           [Arabidopsis thaliana] gi|332010526|gb|AED97909.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 424

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/62 (77%), Positives = 58/62 (93%)
 Frame = +2

Query: 200 KPISDLKDAIVKGLGFEIEDVKISGFDIRDALVGRSVAYEFDIEVDNKVMPLKLLEDVSR 379
           K ISDLK++IVKGLGF+ E+VK+SGFDIRDALVG SV+YEFD+E+DNKV+P KLLEDV+R
Sbjct: 38  KAISDLKESIVKGLGFQSEEVKVSGFDIRDALVGHSVSYEFDLEIDNKVLPFKLLEDVNR 97

Query: 380 WE 385
           WE
Sbjct: 98  WE 99


>ref|XP_002864906.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310741|gb|EFH41165.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 425

 Score =  104 bits (259), Expect = 8e-21
 Identities = 47/61 (77%), Positives = 57/61 (93%)
 Frame = +2

Query: 200 KPISDLKDAIVKGLGFEIEDVKISGFDIRDALVGRSVAYEFDIEVDNKVMPLKLLEDVSR 379
           K ISDLK+AIVKGLGF+ E+VK+SGFD+RDALVG SV+YEFD+E+DNKV+P KLLEDV+R
Sbjct: 39  KAISDLKEAIVKGLGFQSEEVKVSGFDVRDALVGHSVSYEFDLEIDNKVLPFKLLEDVNR 98

Query: 380 W 382
           W
Sbjct: 99  W 99


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