BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030813
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22243.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
ref|XP_002533114.1| pentatricopeptide repeat-containing protein,...   129   3e-28
ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japo...   118   6e-25

>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/93 (70%), Positives = 76/93 (81%)
 Frame = +1

Query: 1   RKLFNEVPERDVVTWNVMIAGYVLCGSHEQAFEIYEGMRCAGERPDEVTMLCLLSACTDF 180
           RKLF+EVP+RDVVTWN MIAGYVLCGS++QA E++E MR  GE PDEVTML LLSACTD 
Sbjct: 195 RKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDL 254

Query: 181 GGLDVGQKIHQSIMETGLKRMSTVLGNALIDMY 279
           G LD GQ+IH  I E G + +S +LGNALIDMY
Sbjct: 255 GDLDAGQRIHCCISEMGFRDLSVLLGNALIDMY 287


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/93 (70%), Positives = 76/93 (81%)
 Frame = +1

Query: 1   RKLFNEVPERDVVTWNVMIAGYVLCGSHEQAFEIYEGMRCAGERPDEVTMLCLLSACTDF 180
           RKLF+EVP+RDVVTWN MIAGYVLCGS++QA E++E MR  GE PDEVTML LLSACTD 
Sbjct: 230 RKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDL 289

Query: 181 GGLDVGQKIHQSIMETGLKRMSTVLGNALIDMY 279
           G LD GQ+IH  I E G + +S +LGNALIDMY
Sbjct: 290 GDLDAGQRIHCCISEMGFRDLSVLLGNALIDMY 322


>ref|XP_002533114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527077|gb|EEF29259.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/93 (66%), Positives = 73/93 (78%)
 Frame = +1

Query: 1   RKLFNEVPERDVVTWNVMIAGYVLCGSHEQAFEIYEGMRCAGERPDEVTMLCLLSACTDF 180
           RKLFNEVP RDVVTWN MIAG+V CG +EQA E++E M   GE+PDEVTML LLSACTD 
Sbjct: 230 RKLFNEVPRRDVVTWNAMIAGFVHCGENEQALEMFEEMISVGEQPDEVTMLSLLSACTDL 289

Query: 181 GGLDVGQKIHQSIMETGLKRMSTVLGNALIDMY 279
           G L+VG+K+H SI+E  L  +S +LGNAL  MY
Sbjct: 290 GDLEVGKKVHSSILEMSLGDLSVLLGNALTYMY 322


>ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|222867072|gb|EEF04203.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/93 (63%), Positives = 68/93 (73%)
 Frame = +1

Query: 1   RKLFNEVPERDVVTWNVMIAGYVLCGSHEQAFEIYEGMRCAGERPDEVTMLCLLSACTDF 180
           R LF+E PE+DVVTWN MIAGYVL G   QA E++E MR  GE PDEVTML LLSAC D 
Sbjct: 230 RTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADL 289

Query: 181 GGLDVGQKIHQSIMETGLKRMSTVLGNALIDMY 279
           G L VG+K+H SI E     +S +LGNAL+DMY
Sbjct: 290 GDLQVGRKLHCSISEMTRGDLSVLLGNALVDMY 322


>gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
          Length = 523

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/94 (61%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = +1

Query: 1   RKLFNEVPERDVVTWNVMIAGYVLCGSHEQAFEIYEGMRCAGERPDEVTMLCLLSACTDF 180
           R+LF++VPERDVV+WNVMI+GYV CGSH  A E++E M+  GE+PD VTML LLSAC D 
Sbjct: 199 RELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADS 258

Query: 181 GGLDVGQKIHQSIMETGLKR-MSTVLGNALIDMY 279
           G LDVGQ++H S+ +   +     VLGNALIDMY
Sbjct: 259 GDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMY 292