BLASTX nr result

ID: Coptis24_contig00030808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030808
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261...    86   2e-15
ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa ...    85   5e-15
ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260...    83   2e-14
emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera]    83   2e-14
ref|XP_003594604.1| hypothetical protein MTR_2g031410 [Medicago ...    78   7e-13

>ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261683 [Vitis vinifera]
           gi|297740496|emb|CBI30678.3| unnamed protein product
           [Vitis vinifera]
          Length = 530

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/65 (63%), Positives = 52/65 (80%)
 Frame = +3

Query: 3   VAKEMRAGVFTCRKRYKEIKEALVKVAQGLPWGKNVTDENIVKNAPGIIQYMEIKLRLER 182
           +A E+ AGV T R RYKE+ EALVKVAQ LPWGK+V+ +NI+KNAP +IQYME+K RL  
Sbjct: 239 IANEIHAGVATTRLRYKELSEALVKVAQALPWGKDVSTKNIIKNAPFVIQYMEMKSRLLP 298

Query: 183 GDKRK 197
           G +R+
Sbjct: 299 GKRRE 303


>ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa subunit-like [Glycine
           max]
          Length = 536

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/65 (66%), Positives = 51/65 (78%)
 Frame = +3

Query: 3   VAKEMRAGVFTCRKRYKEIKEALVKVAQGLPWGKNVTDENIVKNAPGIIQYMEIKLRLER 182
           +AKE+ A V TCR RYKE+ E LVKVAQ LPWGK+VT +NIVKNAP +IQYME K  L+ 
Sbjct: 240 LAKEVHAKVSTCRARYKELLETLVKVAQVLPWGKDVTVKNIVKNAPIVIQYMERKAMLKP 299

Query: 183 GDKRK 197
           G KR+
Sbjct: 300 GKKRE 304


>ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260157 [Vitis vinifera]
           gi|297745306|emb|CBI40386.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/63 (63%), Positives = 49/63 (77%)
 Frame = +3

Query: 3   VAKEMRAGVFTCRKRYKEIKEALVKVAQGLPWGKNVTDENIVKNAPGIIQYMEIKLRLER 182
           +A E+ AGV T R RYKE+ EALVKVAQ LPWG +V+ +NIVKNAP +IQYME+KLR + 
Sbjct: 239 IANEIHAGVATSRLRYKELSEALVKVAQSLPWGSDVSTKNIVKNAPFVIQYMEMKLRSQL 298

Query: 183 GDK 191
             K
Sbjct: 299 SGK 301


>emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera]
          Length = 535

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/63 (63%), Positives = 49/63 (77%)
 Frame = +3

Query: 3   VAKEMRAGVFTCRKRYKEIKEALVKVAQGLPWGKNVTDENIVKNAPGIIQYMEIKLRLER 182
           +A E+ AGV T R RYKE+ EALVKVAQ LPWG +V+ +NIVKNAP +IQYME+KLR + 
Sbjct: 239 IANEIHAGVATSRLRYKELSEALVKVAQSLPWGSDVSTKNIVKNAPFVIQYMEMKLRSQL 298

Query: 183 GDK 191
             K
Sbjct: 299 SGK 301


>ref|XP_003594604.1| hypothetical protein MTR_2g031410 [Medicago truncatula]
           gi|355483652|gb|AES64855.1| hypothetical protein
           MTR_2g031410 [Medicago truncatula]
          Length = 532

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/65 (58%), Positives = 49/65 (75%)
 Frame = +3

Query: 3   VAKEMRAGVFTCRKRYKEIKEALVKVAQGLPWGKNVTDENIVKNAPGIIQYMEIKLRLER 182
           +AKE+ A V TCR RY+E+ E LV VAQ LPWGK++T +NI+KNAP +IQYME K   + 
Sbjct: 241 LAKEVHAIVSTCRTRYRELLETLVNVAQVLPWGKDITKKNIIKNAPFVIQYMEKKSMSKP 300

Query: 183 GDKRK 197
            +KRK
Sbjct: 301 VEKRK 305


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