BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030807
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]    85   1e-14
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    77   2e-12
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...    73   4e-11
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    73   4e-11
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    69   4e-10

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
 Frame = -1

Query: 431 GIMSKLPIEIFFDILSRLPIESLSHCRWVSKAWYNAIKDPCFIELQHTKVIHDNCYCVIF 252
           G +  LP++I  DILS LPIE +  CR V K WY   KD  F +LQ  +  + +   ++F
Sbjct: 15  GGLLNLPLDIMADILSLLPIEDILRCRSVCKTWYGLTKDSYFFKLQFRRTFY-HMPRLMF 73

Query: 251 YDKFEVDYHLVSNEDLEALETVAIPHSPSLPRPLCEMHSCNGLVFSAIQ----PYFISNP 84
             K E    L+  +  +A E +A+P    L R L  M SCNGL+  A +    P  ISNP
Sbjct: 74  ISKSENSVFLLDGKQCKARE-IALP--TVLGRNLIVMSSCNGLLCLASEESPNPVIISNP 130

Query: 83  VTGEYIVIPKP--PRYAHVDVVTGFGFDP 3
           +T +YIV+P+     Y+ + +V G G+DP
Sbjct: 131 ITRKYIVLPESVNASYSFIQLV-GLGYDP 158


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 53/152 (34%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
 Frame = -1

Query: 425 MSKLPIEIFFDILSRLPIESLSHCRWVSKAWYNAIKDPCFIELQHTKVIHDNCY-CVIFY 249
           M  LP EI  DILSRLPI SL   + V +AW   ++DP  ++L  +    D  + C+I +
Sbjct: 25  MELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILH 84

Query: 248 DKFEVDYHL------VSNEDLEALETVAIPHSPSLPRPLCEMHSCNGLVFSAIQPY---- 99
             F +  +L         E+ E ++ +  P S  +P     + SCNGL+  +   Y    
Sbjct: 85  CDFPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMMPE-FEVVGSCNGLLCLSDSLYNDSL 143

Query: 98  FISNPVTGEYIVIPKPPRYAHVDVVTGFGFDP 3
           +I NP TG Y  +PK  +Y   +VV+GFGF+P
Sbjct: 144 YIYNPFTGCYKELPKSLQYPDQEVVSGFGFNP 175


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
           gi|223543465|gb|EEF44996.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 401

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
 Frame = -1

Query: 419 KLPIEIFFDILSRLPIESLSHCRWVSKAWYNAIKDPCFIELQHTKVIHDNCYCVIFYD-- 246
           KLP EI+FDILSR PI SL  C+ VS+ WY ++++P    +   +    N  C++F+   
Sbjct: 21  KLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRAAEQN-LCLLFFSDW 79

Query: 245 -KFEVDYHLVSNEDLEALETVAIPHSPSLPRPLCEMHSCNGLV----FSAIQPYFISNPV 81
            + +++   V + +   L+T+  P   S+      + SCNGL+    + +  P +I NP 
Sbjct: 80  PRSKLELVQVEHPEPRKLKTLKTPFE-SVLSEFEVVGSCNGLICLYDYFSDDPLYIYNPF 138

Query: 80  TGEYIVIPK---PPRYAHVDVVTGFGFDP 3
           T E   +P+    P      VV GFGF P
Sbjct: 139 TIECRELPRVEASPHSVICRVVFGFGFHP 167


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
 Frame = -1

Query: 425 MSKLPIEIFFDILSRLPIESLSHCRWVSKAWYNAIKDPCFIELQHTKVIHDNCYCVIFYD 246
           M  LP EI  DILSRLPI SL   + V +AW     DP  + L  +    +   CVI + 
Sbjct: 25  MELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCVILHC 84

Query: 245 KFEVDYHL------VSNEDLEALETVAIPHSPSLPRPLCEMHSCNGLVFSAIQPY----F 96
            F +  +L         E+ E ++ +  P S  +P     + SCNGL+  +   +    +
Sbjct: 85  DFPIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMMPE-FEVVGSCNGLLCLSDSLFNDSLY 143

Query: 95  ISNPVTGEYIVIPKPPRYAHVDVVTGFGFDP 3
           I NP TG Y  +PK  +Y   +VV GFGF+P
Sbjct: 144 IYNPFTGRYKELPKSLQYPDQEVVFGFGFNP 174


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
 Frame = -1

Query: 416 LPIEIFFDILSRLPIESLSHCRWVSKAWYNAIKDPCFIELQHTKVIHDNCYCVIFYDKFE 237
           LP E+  DILSRLPI  L + + V + W + ++ P    +  +++ ++N  C++      
Sbjct: 26  LPCELALDILSRLPITHLINVKRVCRFWRSLVQHPLLASMHFSRIANNNDPCLLLLCDLP 85

Query: 236 VDYHLVSNE----DLEALETVAIPHSPSLPRPLCEMHSCNGLVF--SAIQ--PYFISNPV 81
           +  HL S      D   +ETV     P +P+ L  + SCNGL++   ++Q    +I NP 
Sbjct: 86  IKSHLYSLHFSALDETIIETVTRIPVPVIPKFLV-IGSCNGLLYLLDSLQQRANYIYNPF 144

Query: 80  TGEYIVIPKPPRYAHVD-VVTGFGF 9
           T +Y+ +P+P +  +   V TGFGF
Sbjct: 145 TSDYLELPEPGQVLNQHRVATGFGF 169