BLASTX nr result

ID: Coptis24_contig00030797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030797
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [S...    75   1e-22
ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [S...    74   3e-22
ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S...    74   3e-22
ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [S...    74   3e-22
ref|XP_002437574.1| hypothetical protein SORBIDRAFT_10g029600 [S...    71   8e-22

>ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [Sorghum bicolor]
           gi|241914965|gb|EER88109.1| hypothetical protein
           SORBIDRAFT_10g007990 [Sorghum bicolor]
          Length = 143

 Score = 74.7 bits (182), Expect(2) = 1e-22
 Identities = 37/63 (58%), Positives = 46/63 (73%)
 Frame = +2

Query: 110 TSHNSQ*QTLPHVGIYLPYHVFDHGQLYVALSRGVSRSTTKVLVRNGVIKGFTCTFTRNV 289
           T + +Q QT+P+VGIYLP HVF HGQLYVALSRGVSR TT++L +       T   T+N+
Sbjct: 76  TINKAQGQTIPNVGIYLPEHVFSHGQLYVALSRGVSRQTTRILSKPNKELDSTGKSTKNI 135

Query: 290 VYK 298
           VYK
Sbjct: 136 VYK 138



 Score = 57.0 bits (136), Expect(2) = 1e-22
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = +1

Query: 7   FLHRIPMKPSEDLNLPFDFTRKQFPIRLGFSLTVHKSQ 120
           FL RIPM PS+D++LPF   RKQFPIRL F++T++K+Q
Sbjct: 44  FLPRIPMSPSDDISLPFKMKRKQFPIRLSFAMTINKAQ 81


>ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [Sorghum bicolor]
            gi|241937646|gb|EES10791.1| hypothetical protein
            SORBIDRAFT_06g016400 [Sorghum bicolor]
          Length = 998

 Score = 73.6 bits (179), Expect(2) = 3e-22
 Identities = 38/63 (60%), Positives = 46/63 (73%)
 Frame = +2

Query: 110  TSHNSQ*QTLPHVGIYLPYHVFDHGQLYVALSRGVSRSTTKVLVRNGVIKGFTCTFTRNV 289
            T + +Q QT+P+VGIYLP  VF HGQLYVALSRGVSRSTT+VL +       T   T+N+
Sbjct: 931  TINKAQGQTIPNVGIYLPEPVFSHGQLYVALSRGVSRSTTRVLAKPNQELDGTGNTTKNI 990

Query: 290  VYK 298
            VYK
Sbjct: 991  VYK 993



 Score = 56.2 bits (134), Expect(2) = 3e-22
 Identities = 23/38 (60%), Positives = 32/38 (84%)
 Frame = +1

Query: 7    FLHRIPMKPSEDLNLPFDFTRKQFPIRLGFSLTVHKSQ 120
            F+ RIPM PS+D++LPF   RKQFPIRL F++T++K+Q
Sbjct: 899  FITRIPMSPSDDISLPFKLKRKQFPIRLSFAMTINKAQ 936


>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
           gi|241936047|gb|EES09192.1| hypothetical protein
           SORBIDRAFT_05g001940 [Sorghum bicolor]
          Length = 526

 Score = 73.6 bits (179), Expect(2) = 3e-22
 Identities = 37/63 (58%), Positives = 46/63 (73%)
 Frame = +2

Query: 110 TSHNSQ*QTLPHVGIYLPYHVFDHGQLYVALSRGVSRSTTKVLVRNGVIKGFTCTFTRNV 289
           T + +Q QT+PHVGIYLP  VF HGQLYVALSRGVSR TT+VL +       +  +T+N+
Sbjct: 459 TINKTQGQTIPHVGIYLPEPVFSHGQLYVALSRGVSRQTTRVLAKPKKELDPSGKYTKNI 518

Query: 290 VYK 298
           VYK
Sbjct: 519 VYK 521



 Score = 56.2 bits (134), Expect(2) = 3e-22
 Identities = 23/38 (60%), Positives = 32/38 (84%)
 Frame = +1

Query: 7   FLHRIPMKPSEDLNLPFDFTRKQFPIRLGFSLTVHKSQ 120
           F+ RIPM PS+D++LPF   RKQFPIRL F++T++K+Q
Sbjct: 427 FIPRIPMSPSDDISLPFKLKRKQFPIRLSFAMTINKTQ 464


>ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [Sorghum bicolor]
           gi|241944914|gb|EES18059.1| hypothetical protein
           SORBIDRAFT_09g017230 [Sorghum bicolor]
          Length = 512

 Score = 73.6 bits (179), Expect(2) = 3e-22
 Identities = 38/63 (60%), Positives = 46/63 (73%)
 Frame = +2

Query: 110 TSHNSQ*QTLPHVGIYLPYHVFDHGQLYVALSRGVSRSTTKVLVRNGVIKGFTCTFTRNV 289
           T + +Q QT+P+VGIYLP  VF HGQLYVALSRGVSRSTT+VL +       T   T+N+
Sbjct: 445 TINKAQGQTIPNVGIYLPEPVFSHGQLYVALSRGVSRSTTRVLAKPNQELDGTGNTTKNI 504

Query: 290 VYK 298
           VYK
Sbjct: 505 VYK 507



 Score = 56.2 bits (134), Expect(2) = 3e-22
 Identities = 23/38 (60%), Positives = 32/38 (84%)
 Frame = +1

Query: 7   FLHRIPMKPSEDLNLPFDFTRKQFPIRLGFSLTVHKSQ 120
           F+ RIPM PS+D++LPF   RKQFPIRL F++T++K+Q
Sbjct: 413 FITRIPMSPSDDISLPFKLKRKQFPIRLSFAMTINKAQ 450


>ref|XP_002437574.1| hypothetical protein SORBIDRAFT_10g029600 [Sorghum bicolor]
           gi|241915797|gb|EER88941.1| hypothetical protein
           SORBIDRAFT_10g029600 [Sorghum bicolor]
          Length = 124

 Score = 71.2 bits (173), Expect(2) = 8e-22
 Identities = 36/63 (57%), Positives = 46/63 (73%)
 Frame = +2

Query: 110 TSHNSQ*QTLPHVGIYLPYHVFDHGQLYVALSRGVSRSTTKVLVRNGVIKGFTCTFTRNV 289
           T + SQ QT+P+VGIYLP  VF HGQLYV LSRGVSR+TT++L ++      T   T+N+
Sbjct: 57  TINKSQGQTIPNVGIYLPEPVFSHGQLYVCLSRGVSRATTRILAKSKEDLDPTGKSTKNI 116

Query: 290 VYK 298
           VYK
Sbjct: 117 VYK 119



 Score = 57.4 bits (137), Expect(2) = 8e-22
 Identities = 22/38 (57%), Positives = 33/38 (86%)
 Frame = +1

Query: 7   FLHRIPMKPSEDLNLPFDFTRKQFPIRLGFSLTVHKSQ 120
           F+ R+P+ PS+D++LPF F RKQFP+RL F++T++KSQ
Sbjct: 25  FIPRLPLSPSDDISLPFKFKRKQFPVRLSFAMTINKSQ 62


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