BLASTX nr result

ID: Coptis24_contig00030796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030796
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533279.1| serine-threonine protein kinase, plant-type,...   114   1e-23
ref|XP_003549419.1| PREDICTED: leucine-rich repeat receptor prot...   112   2e-23
ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor prot...   109   3e-22
ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine...   104   9e-21

>ref|XP_002533279.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526904|gb|EEF29111.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 617

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/91 (59%), Positives = 67/91 (73%)
 Frame = +1

Query: 1   VPLRCACPTSNQIAMGTNYLLTYSIFWGDNITALSRRFNVSRKNMLDANGFHEEYPTIFP 180
           VPLRCACPTSNQ A GT YLLTYS+ WGD + A+S RFN S  ++  ANGF ++  T+FP
Sbjct: 166 VPLRCACPTSNQSANGTKYLLTYSVSWGDKVRAVSERFNASIDSVNYANGFTKDDTTLFP 225

Query: 181 FTTILIPLPVEPSSSQTVIHFSTIGSPNYTP 273
           FTTIL+PL  EPSS QT++H+     P Y+P
Sbjct: 226 FTTILVPLSTEPSSFQTIVHYP---PPPYSP 253


>ref|XP_003549419.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Glycine max]
          Length = 633

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/97 (57%), Positives = 68/97 (70%)
 Frame = +1

Query: 1   VPLRCACPTSNQIAMGTNYLLTYSIFWGDNITALSRRFNVSRKNMLDANGFHEEYPTIFP 180
           VPLRCACPT +QI  GT YLLTYS+ WGDNIT ++ RFNV+  N++DANGF  +  TIFP
Sbjct: 168 VPLRCACPTWHQITNGTKYLLTYSVNWGDNITNIAARFNVAAGNVVDANGFSTQTQTIFP 227

Query: 181 FTTILIPLPVEPSSSQTVIHFSTIGSPNYTPIARKQK 291
           FTT+LIPLP EP SS T I       P+ +P+    K
Sbjct: 228 FTTVLIPLPSEPVSSMTRI---VSDPPDVSPLVCSSK 261


>ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Glycine max]
          Length = 636

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/92 (57%), Positives = 66/92 (71%)
 Frame = +1

Query: 1   VPLRCACPTSNQIAMGTNYLLTYSIFWGDNITALSRRFNVSRKNMLDANGFHEEYPTIFP 180
           VPLRCACPT +QI  GT YLLTYS+ WGD+I  ++ RFNV+  N++DANGF  +  TIFP
Sbjct: 168 VPLRCACPTWHQITNGTKYLLTYSVNWGDSIKNIAARFNVAAGNVVDANGFSTQTQTIFP 227

Query: 181 FTTILIPLPVEPSSSQTVIHFSTIGSPNYTPI 276
           FTT+LIPLP EP SS  +I     G P  +P+
Sbjct: 228 FTTVLIPLPSEPVSSMAII---VNGPPAVSPL 256


>ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|222835216|gb|EEE73651.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/91 (58%), Positives = 68/91 (74%)
 Frame = +1

Query: 1   VPLRCACPTSNQIAMGTNYLLTYSIFWGDNITALSRRFNVSRKNMLDANGFHEEYPTIFP 180
           VPLRCACPT+NQ+  GT YL+TY +   DNI  ++ RF VS K++LDANG  EE PT++P
Sbjct: 166 VPLRCACPTTNQMIRGTKYLVTYPLSSDDNIPDIADRFKVSTKDILDANGM-EENPTLYP 224

Query: 181 FTTILIPLPVEPSSSQTVIHFSTIGSPNYTP 273
            TTILIPLP +P+SSQT+IH     +PN +P
Sbjct: 225 DTTILIPLPTQPTSSQTIIH----SNPNISP 251


>ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Vitis vinifera]
          Length = 622

 Score =  104 bits (259), Expect = 9e-21
 Identities = 52/81 (64%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1   VPLRCACPTSNQIAMGTNYLLTYSIFWGDNITALSRRFNVSRKNMLDANG-FHEEYPTIF 177
           VPLRCAC T +Q   GT YLLTYS+ W DN   +  RFNVS K++ DANG   EE PTIF
Sbjct: 166 VPLRCACHTEHQAENGTKYLLTYSVSWEDNFPTIGERFNVSAKSIADANGLISEENPTIF 225

Query: 178 PFTTILIPLPVEPSSSQTVIH 240
           PFTTILIPL  EP SSQT  H
Sbjct: 226 PFTTILIPLKTEPLSSQTKTH 246


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