BLASTX nr result

ID: Coptis24_contig00030782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030782
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37166.3| unnamed protein product [Vitis vinifera]              148   6e-34
ref|XP_002271181.1| PREDICTED: uncharacterized protein LOC100256...   148   6e-34
ref|XP_002526564.1| conserved hypothetical protein [Ricinus comm...   148   6e-34
ref|XP_003520612.1| PREDICTED: uncharacterized protein LOC100787...   145   4e-33
ref|XP_002303119.1| predicted protein [Populus trichocarpa] gi|2...   145   5e-33

>emb|CBI37166.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  148 bits (373), Expect = 6e-34
 Identities = 84/181 (46%), Positives = 112/181 (61%), Gaps = 6/181 (3%)
 Frame = +3

Query: 24  GSETPLAEKEVNS----PLPLSRTGPEEMKTLSSNQNTRDRSQYVHSVLNPVENLAQWKV 191
           GS+T ++  +V +    P  +  +   E+KT+ +N N RDRS YVH VLNPVENL QWK 
Sbjct: 174 GSKTRISPAQVITEEVDPKAICPSPQRELKTIGANPNARDRSTYVHPVLNPVENLTQWKA 233

Query: 192 AKKRSKPPLIQQKENTNLDQE-LQIPFSLEPIFXXXXXXXXXXXXXXXXXXEELVVDASL 368
            K +  PPL  QKEN   D+E  ++ FS+EP F                  +E+ V+ASL
Sbjct: 234 VKGKGTPPLKLQKENLTSDKEPPRLSFSMEPNFKQSSFSNKSKINEPENLNQEIAVNASL 293

Query: 369 SNWLGSSETTPSTKTSNLSIGNE-SAERSMSQRSNSPRSHEDRPILGALTVEELRHFSAT 545
           S WL SSETTP+ KTS + + +  S ++  S  SNSPRS EDRPILGALT+EE+R FSA+
Sbjct: 294 STWLVSSETTPTNKTSPIGVVDTISYQKGASYTSNSPRSQEDRPILGALTLEEIRQFSAS 353

Query: 546 S 548
           +
Sbjct: 354 N 354


>ref|XP_002271181.1| PREDICTED: uncharacterized protein LOC100256663 [Vitis vinifera]
          Length = 451

 Score =  148 bits (373), Expect = 6e-34
 Identities = 84/181 (46%), Positives = 112/181 (61%), Gaps = 6/181 (3%)
 Frame = +3

Query: 24  GSETPLAEKEVNS----PLPLSRTGPEEMKTLSSNQNTRDRSQYVHSVLNPVENLAQWKV 191
           GS+T ++  +V +    P  +  +   E+KT+ +N N RDRS YVH VLNPVENL QWK 
Sbjct: 196 GSKTRISPAQVITEEVDPKAICPSPQRELKTIGANPNARDRSTYVHPVLNPVENLTQWKA 255

Query: 192 AKKRSKPPLIQQKENTNLDQE-LQIPFSLEPIFXXXXXXXXXXXXXXXXXXEELVVDASL 368
            K +  PPL  QKEN   D+E  ++ FS+EP F                  +E+ V+ASL
Sbjct: 256 VKGKGTPPLKLQKENLTSDKEPPRLSFSMEPNFKQSSFSNKSKINEPENLNQEIAVNASL 315

Query: 369 SNWLGSSETTPSTKTSNLSIGNE-SAERSMSQRSNSPRSHEDRPILGALTVEELRHFSAT 545
           S WL SSETTP+ KTS + + +  S ++  S  SNSPRS EDRPILGALT+EE+R FSA+
Sbjct: 316 STWLVSSETTPTNKTSPIGVVDTISYQKGASYTSNSPRSQEDRPILGALTLEEIRQFSAS 375

Query: 546 S 548
           +
Sbjct: 376 N 376


>ref|XP_002526564.1| conserved hypothetical protein [Ricinus communis]
           gi|223534125|gb|EEF35842.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 451

 Score =  148 bits (373), Expect = 6e-34
 Identities = 84/167 (50%), Positives = 102/167 (61%)
 Frame = +3

Query: 48  KEVNSPLPLSRTGPEEMKTLSSNQNTRDRSQYVHSVLNPVENLAQWKVAKKRSKPPLIQQ 227
           +EV+S +  S     E+K    N N RDRS YVHSVLNPVENL QWK  K +  P L QQ
Sbjct: 208 EEVDSSVMTSSLHDREVKP---NPNARDRSGYVHSVLNPVENLTQWKAVKAKGTPLLKQQ 264

Query: 228 KENTNLDQELQIPFSLEPIFXXXXXXXXXXXXXXXXXXEELVVDASLSNWLGSSETTPST 407
           KEN  L QE +  FS EP F                  +E+ VDASLSNWLGSSE+TP +
Sbjct: 265 KENHTLGQEPRTSFSSEPSFRELSFSFKAKSEQSKKANQEVAVDASLSNWLGSSESTPIS 324

Query: 408 KTSNLSIGNESAERSMSQRSNSPRSHEDRPILGALTVEELRHFSATS 548
           K S       + E+S +  SNSP+S EDRPILGALT+EE++ FSA+S
Sbjct: 325 KPSTNGFDTFTPEKSTTVGSNSPKSFEDRPILGALTMEEIKQFSASS 371


>ref|XP_003520612.1| PREDICTED: uncharacterized protein LOC100787541 [Glycine max]
          Length = 477

 Score =  145 bits (366), Expect = 4e-33
 Identities = 83/166 (50%), Positives = 100/166 (60%)
 Frame = +3

Query: 51  EVNSPLPLSRTGPEEMKTLSSNQNTRDRSQYVHSVLNPVENLAQWKVAKKRSKPPLIQQK 230
           EV SP+P+     +++K++  N N RDRS YV+ +LNPVENL QWK  K +  PPL+ QK
Sbjct: 200 EVESPIPMH---DKDLKSIGLNSNVRDRSVYVNPLLNPVENLTQWKTVKAKRAPPLVSQK 256

Query: 231 ENTNLDQELQIPFSLEPIFXXXXXXXXXXXXXXXXXXEELVVDASLSNWLGSSETTPSTK 410
           EN  L+QE +  F  E                      E+ VDASLSNWLGSSETTP   
Sbjct: 257 ENLVLNQESRAAFGAE-------------TETPKKLNREIAVDASLSNWLGSSETTP-VV 302

Query: 411 TSNLSIGNESAERSMSQRSNSPRSHEDRPILGALTVEELRHFSATS 548
           +  L  G      S SQ SNS  SHEDRPILGALTVEEL+HFSA+S
Sbjct: 303 SKGLYAGTPERSSSSSQGSNSVVSHEDRPILGALTVEELKHFSASS 348


>ref|XP_002303119.1| predicted protein [Populus trichocarpa] gi|222844845|gb|EEE82392.1|
           predicted protein [Populus trichocarpa]
          Length = 983

 Score =  145 bits (365), Expect = 5e-33
 Identities = 81/149 (54%), Positives = 97/149 (65%), Gaps = 1/149 (0%)
 Frame = +3

Query: 105 LSSNQNTRDRSQYVHSVLNPVENLAQWKVAKKRSKPPLIQQKENTNLDQELQIPFSLEPI 284
           LS N+N RDR     +VLNPVENL+QWK+ K + KP L QQKEN  LDQE ++ FS EP 
Sbjct: 212 LSGNRNFRDRRA---AVLNPVENLSQWKIVKAKGKPSLRQQKENLTLDQEPRMSFSSEPG 268

Query: 285 FXXXXXXXXXXXXXXXXXXE-ELVVDASLSNWLGSSETTPSTKTSNLSIGNESAERSMSQ 461
           F                  + E+ VD SLSNWLGSSE TP  K  ++ +   + E+SMSQ
Sbjct: 269 FKELAFSFKAKAGQCNKKPDQEIAVDTSLSNWLGSSECTPVNKPGSIGLDAIAPEKSMSQ 328

Query: 462 RSNSPRSHEDRPILGALTVEELRHFSATS 548
            SNSPRS +DRPILGALTVEEL+H SATS
Sbjct: 329 GSNSPRSFDDRPILGALTVEELKHLSATS 357


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