BLASTX nr result
ID: Coptis24_contig00030775
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030775 (399 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26414.3| unnamed protein product [Vitis vinifera] 213 1e-53 ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Viti... 213 1e-53 ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arab... 202 2e-50 ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricin... 202 3e-50 ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thali... 201 5e-50 >emb|CBI26414.3| unnamed protein product [Vitis vinifera] Length = 789 Score = 213 bits (543), Expect = 1e-53 Identities = 104/132 (78%), Positives = 116/132 (87%) Frame = -2 Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219 GAGATS MQGF+++LG+DGCSI VALESRHGDPTFSKLFGKS+RIDRIHGLADALTYERN Sbjct: 199 GAGATSCMQGFVDSLGKDGCSISVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERN 258 Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39 CEALMLLQK+GLQK+NPSIA+VATLFG+KEDV LE+N LVDW E LD L+ G YD S Sbjct: 259 CEALMLLQKNGLQKKNPSIAVVATLFGDKEDVAWLEENDLVDWAEVGLDELLESGAYDDS 318 Query: 38 QLKAIAFGLTKK 3 Q +AIA GL KK Sbjct: 319 QRRAIALGLNKK 330 >ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera] Length = 953 Score = 213 bits (543), Expect = 1e-53 Identities = 104/132 (78%), Positives = 116/132 (87%) Frame = -2 Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219 GAGATS MQGF+++LG+DGCSI VALESRHGDPTFSKLFGKS+RIDRIHGLADALTYERN Sbjct: 363 GAGATSCMQGFVDSLGKDGCSISVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERN 422 Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39 CEALMLLQK+GLQK+NPSIA+VATLFG+KEDV LE+N LVDW E LD L+ G YD S Sbjct: 423 CEALMLLQKNGLQKKNPSIAVVATLFGDKEDVAWLEENDLVDWAEVGLDELLESGAYDDS 482 Query: 38 QLKAIAFGLTKK 3 Q +AIA GL KK Sbjct: 483 QRRAIALGLNKK 494 >ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp. lyrata] gi|297316296|gb|EFH46719.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp. lyrata] Length = 979 Score = 202 bits (514), Expect = 2e-50 Identities = 98/132 (74%), Positives = 114/132 (86%) Frame = -2 Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219 GAGAT+ QGF++NLGEDGCSI VALESRHGDPTFSKLFGKS+RIDRIHGLADALTYERN Sbjct: 389 GAGATACTQGFVHNLGEDGCSIGVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERN 448 Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39 CEALMLLQK+GLQK+NPSI++VATLFG++ED+ LEQN VDW+E EL ++DSS Sbjct: 449 CEALMLLQKNGLQKKNPSISVVATLFGDEEDITWLEQNDYVDWSEAELSDEPVSKLFDSS 508 Query: 38 QLKAIAFGLTKK 3 Q +AIA G+ KK Sbjct: 509 QRRAIALGVNKK 520 >ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis] gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2, putative [Ricinus communis] Length = 989 Score = 202 bits (513), Expect = 3e-50 Identities = 97/132 (73%), Positives = 111/132 (84%) Frame = -2 Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219 GAGATS MQGF+NNLGEDGCSI VALESRHGDPTFSKLFGK +RIDRIHGLADALTYERN Sbjct: 399 GAGATSCMQGFVNNLGEDGCSISVALESRHGDPTFSKLFGKGVRIDRIHGLADALTYERN 458 Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39 CEALMLLQK+GLQK+NPSIAIVATLFG+ ED+ LE+ L +W E ++DG +D S Sbjct: 459 CEALMLLQKNGLQKKNPSIAIVATLFGDSEDLAWLEEKDLAEWNEADMDGCFGSERFDDS 518 Query: 38 QLKAIAFGLTKK 3 Q +A+A GL +K Sbjct: 519 QRRAMALGLNQK 530 >ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thaliana] gi|332006651|gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] Length = 961 Score = 201 bits (511), Expect = 5e-50 Identities = 98/132 (74%), Positives = 113/132 (85%) Frame = -2 Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219 GAGAT+ QGF++NLGEDGCSI VALESRHGDPTFSKLFGKS+RIDRIHGLADALTYERN Sbjct: 371 GAGATACTQGFVHNLGEDGCSIGVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERN 430 Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39 CEALMLLQK+GLQK+NPSI++VATLFG+ ED+ LEQN VDW+E EL ++DSS Sbjct: 431 CEALMLLQKNGLQKKNPSISVVATLFGDGEDITWLEQNDYVDWSEAELSDEPVSKLFDSS 490 Query: 38 QLKAIAFGLTKK 3 Q +AIA G+ KK Sbjct: 491 QRRAIALGVNKK 502