BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030775
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26414.3| unnamed protein product [Vitis vinifera]              213   1e-53
ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Viti...   213   1e-53
ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arab...   202   2e-50
ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricin...   202   3e-50
ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thali...   201   5e-50

>emb|CBI26414.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/132 (78%), Positives = 116/132 (87%)
 Frame = -2

Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219
           GAGATS MQGF+++LG+DGCSI VALESRHGDPTFSKLFGKS+RIDRIHGLADALTYERN
Sbjct: 199 GAGATSCMQGFVDSLGKDGCSISVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERN 258

Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39
           CEALMLLQK+GLQK+NPSIA+VATLFG+KEDV  LE+N LVDW E  LD  L+ G YD S
Sbjct: 259 CEALMLLQKNGLQKKNPSIAVVATLFGDKEDVAWLEENDLVDWAEVGLDELLESGAYDDS 318

Query: 38  QLKAIAFGLTKK 3
           Q +AIA GL KK
Sbjct: 319 QRRAIALGLNKK 330


>ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
          Length = 953

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/132 (78%), Positives = 116/132 (87%)
 Frame = -2

Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219
           GAGATS MQGF+++LG+DGCSI VALESRHGDPTFSKLFGKS+RIDRIHGLADALTYERN
Sbjct: 363 GAGATSCMQGFVDSLGKDGCSISVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERN 422

Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39
           CEALMLLQK+GLQK+NPSIA+VATLFG+KEDV  LE+N LVDW E  LD  L+ G YD S
Sbjct: 423 CEALMLLQKNGLQKKNPSIAVVATLFGDKEDVAWLEENDLVDWAEVGLDELLESGAYDDS 482

Query: 38  QLKAIAFGLTKK 3
           Q +AIA GL KK
Sbjct: 483 QRRAIALGLNKK 494


>ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
           lyrata] gi|297316296|gb|EFH46719.1| hypothetical protein
           ARALYDRAFT_493645 [Arabidopsis lyrata subsp. lyrata]
          Length = 979

 Score =  202 bits (514), Expect = 2e-50
 Identities = 98/132 (74%), Positives = 114/132 (86%)
 Frame = -2

Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219
           GAGAT+  QGF++NLGEDGCSI VALESRHGDPTFSKLFGKS+RIDRIHGLADALTYERN
Sbjct: 389 GAGATACTQGFVHNLGEDGCSIGVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERN 448

Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39
           CEALMLLQK+GLQK+NPSI++VATLFG++ED+  LEQN  VDW+E EL       ++DSS
Sbjct: 449 CEALMLLQKNGLQKKNPSISVVATLFGDEEDITWLEQNDYVDWSEAELSDEPVSKLFDSS 508

Query: 38  QLKAIAFGLTKK 3
           Q +AIA G+ KK
Sbjct: 509 QRRAIALGVNKK 520


>ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
           gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2,
           putative [Ricinus communis]
          Length = 989

 Score =  202 bits (513), Expect = 3e-50
 Identities = 97/132 (73%), Positives = 111/132 (84%)
 Frame = -2

Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219
           GAGATS MQGF+NNLGEDGCSI VALESRHGDPTFSKLFGK +RIDRIHGLADALTYERN
Sbjct: 399 GAGATSCMQGFVNNLGEDGCSISVALESRHGDPTFSKLFGKGVRIDRIHGLADALTYERN 458

Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39
           CEALMLLQK+GLQK+NPSIAIVATLFG+ ED+  LE+  L +W E ++DG      +D S
Sbjct: 459 CEALMLLQKNGLQKKNPSIAIVATLFGDSEDLAWLEEKDLAEWNEADMDGCFGSERFDDS 518

Query: 38  QLKAIAFGLTKK 3
           Q +A+A GL +K
Sbjct: 519 QRRAMALGLNQK 530


>ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thaliana]
           gi|332006651|gb|AED94034.1| putative DNA-binding protein
           [Arabidopsis thaliana]
          Length = 961

 Score =  201 bits (511), Expect = 5e-50
 Identities = 98/132 (74%), Positives = 113/132 (85%)
 Frame = -2

Query: 398 GAGATSSMQGFINNLGEDGCSIVVALESRHGDPTFSKLFGKSIRIDRIHGLADALTYERN 219
           GAGAT+  QGF++NLGEDGCSI VALESRHGDPTFSKLFGKS+RIDRIHGLADALTYERN
Sbjct: 371 GAGATACTQGFVHNLGEDGCSIGVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERN 430

Query: 218 CEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSS 39
           CEALMLLQK+GLQK+NPSI++VATLFG+ ED+  LEQN  VDW+E EL       ++DSS
Sbjct: 431 CEALMLLQKNGLQKKNPSISVVATLFGDGEDITWLEQNDYVDWSEAELSDEPVSKLFDSS 490

Query: 38  QLKAIAFGLTKK 3
           Q +AIA G+ KK
Sbjct: 491 QRRAIALGVNKK 502