BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030759
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   214   8e-54
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   213   1e-53
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              213   1e-53
ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata] g...   199   2e-49

>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  214 bits (544), Expect = 8e-54
 Identities = 104/128 (81%), Positives = 114/128 (89%)
 Frame = -3

Query: 386 RVQLVADKILKLQPEEFVADVLDGRPVQMTPTDFCFLVKWVGQSSWQRALELYEWLNLRQ 207
           RVQ + D+IL L+ EEFVADVLD R VQMTPTDFCF+VKWVGQSSWQRALE+YEWLNLR 
Sbjct: 155 RVQFLTDRILGLKSEEFVADVLDDRKVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRH 214

Query: 206 WYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQ 27
           WYSPNARMLATILSVLGKANQE LAVE+F RAE   G+TVQVYNAMMGVY+R GRF KVQ
Sbjct: 215 WYSPNARMLATILSVLGKANQEALAVEIFARAEAAXGNTVQVYNAMMGVYARTGRFTKVQ 274

Query: 26  ELLELMKS 3
           ELL+LM+S
Sbjct: 275 ELLDLMRS 282


>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/128 (81%), Positives = 114/128 (89%)
 Frame = -3

Query: 386 RVQLVADKILKLQPEEFVADVLDGRPVQMTPTDFCFLVKWVGQSSWQRALELYEWLNLRQ 207
           RVQ + D+IL L+ EEFVADVLD R VQMTPTDFCF+VKWVGQSSWQRALE+YEWLNLR 
Sbjct: 123 RVQFLTDRILGLKSEEFVADVLDDRKVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRH 182

Query: 206 WYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQ 27
           WYSPNARMLATILSVLGKANQE LAVE+F RAE   G+TVQVYNAMMGVY+R GRF KVQ
Sbjct: 183 WYSPNARMLATILSVLGKANQEALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQ 242

Query: 26  ELLELMKS 3
           ELL+LM+S
Sbjct: 243 ELLDLMRS 250


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/128 (81%), Positives = 114/128 (89%)
 Frame = -3

Query: 386 RVQLVADKILKLQPEEFVADVLDGRPVQMTPTDFCFLVKWVGQSSWQRALELYEWLNLRQ 207
           RVQ + D+IL L+ EEFVADVLD R VQMTPTDFCF+VKWVGQSSWQRALE+YEWLNLR 
Sbjct: 98  RVQFLTDRILGLKSEEFVADVLDDRKVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRH 157

Query: 206 WYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQ 27
           WYSPNARMLATILSVLGKANQE LAVE+F RAE   G+TVQVYNAMMGVY+R GRF KVQ
Sbjct: 158 WYSPNARMLATILSVLGKANQEALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQ 217

Query: 26  ELLELMKS 3
           ELL+LM+S
Sbjct: 218 ELLDLMRS 225


>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Glycine max]
          Length = 1476

 Score =  199 bits (506), Expect = 2e-49
 Identities = 97/127 (76%), Positives = 111/127 (87%)
 Frame = -3

Query: 386 RVQLVADKILKLQPEEFVADVLDGRPVQMTPTDFCFLVKWVGQSSWQRALELYEWLNLRQ 207
           RV+ + D IL L+ EEFVA VL+ R VQMTPTDFCF+VKWVGQ +WQRALELYE LNLR 
Sbjct: 150 RVKYLTDTILALKSEEFVAGVLEERRVQMTPTDFCFVVKWVGQQNWQRALELYECLNLRH 209

Query: 206 WYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQ 27
           WY+PNARM+ATIL VLGKANQE LAVE+F RAE  VGDTVQVYNAMMGVY+RNGRF+KV+
Sbjct: 210 WYAPNARMVATILGVLGKANQEALAVEIFARAESSVGDTVQVYNAMMGVYARNGRFSKVK 269

Query: 26  ELLELMK 6
           ELL+LM+
Sbjct: 270 ELLDLMR 276


>ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
           gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1429

 Score =  199 bits (506), Expect = 2e-49
 Identities = 93/127 (73%), Positives = 111/127 (87%)
 Frame = -3

Query: 386 RVQLVADKILKLQPEEFVADVLDGRPVQMTPTDFCFLVKWVGQSSWQRALELYEWLNLRQ 207
           RV+ + DKIL L+P +FVAD+LD RPVQMTPTD+CF+VK VGQ SWQRALE++EWLNLR 
Sbjct: 126 RVKFLTDKILSLKPNQFVADILDARPVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRH 185

Query: 206 WYSPNARMLATILSVLGKANQEKLAVELFTRAEPGVGDTVQVYNAMMGVYSRNGRFAKVQ 27
           W+SPNARM+A IL VLG+ NQE LAVE+FTRAEP VGD VQVYNAMMGVYSR+G+F+K Q
Sbjct: 186 WHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQ 245

Query: 26  ELLELMK 6
           ELL+ M+
Sbjct: 246 ELLDAMR 252