BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030737
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300407.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-18
ref|XP_004146040.1| PREDICTED: RNA exonuclease 4-like [Cucumis s...    76   4e-18
gb|ADN33800.1| RNA exonuclease [Cucumis melo subsp. melo]              76   5e-18
ref|XP_003539610.1| PREDICTED: RNA exonuclease 4-like [Glycine max]    72   6e-18
ref|XP_002518369.1| RNA exonuclease, putative [Ricinus communis]...    75   2e-17

>ref|XP_002300407.1| predicted protein [Populus trichocarpa] gi|222847665|gb|EEE85212.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 74.3 bits (181), Expect(2) = 3e-18
 Identities = 32/47 (68%), Positives = 41/47 (87%)
 Frame = +3

Query: 174 RRRALKSLALEFLNAKIQDGAHCPVDDARAAMLLYQKHKKAWERSLK 314
           RR+AL+ LA EFL AKIQ G HCP++DARAAMLLYQ++KK WE+S++
Sbjct: 195 RRKALRHLAAEFLGAKIQSGEHCPIEDARAAMLLYQRNKKEWEKSIR 241



 Score = 42.4 bits (98), Expect(2) = 3e-18
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +1

Query: 1   KALLLSHPRNHIRDTSEYQPFLK 69
           KALLL HP+  +RDTSEYQPFLK
Sbjct: 170 KALLLGHPKKDLRDTSEYQPFLK 192


>ref|XP_004146040.1| PREDICTED: RNA exonuclease 4-like [Cucumis sativus]
           gi|449510336|ref|XP_004163636.1| PREDICTED: RNA
           exonuclease 4-like [Cucumis sativus]
          Length = 263

 Score = 76.3 bits (186), Expect(2) = 4e-18
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 150 YTF*NREGRRRALKSLALEFLNAKIQDGAHCPVDDARAAMLLYQKHKKAWERSLK 314
           Y F  +EG +RAL+ LA EFL+ +IQ+G HCPV+DAR+AMLLYQK +K WE+S+K
Sbjct: 184 YQFFQKEGCKRALRHLAAEFLSVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 238



 Score = 40.0 bits (92), Expect(2) = 4e-18
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +1

Query: 1   KALLLSHPRNHIRDTSEYQPFLK 69
           KALLLSHP+N +RDTSEYQ F K
Sbjct: 167 KALLLSHPKNDVRDTSEYQFFQK 189


>gb|ADN33800.1| RNA exonuclease [Cucumis melo subsp. melo]
          Length = 265

 Score = 75.9 bits (185), Expect(2) = 5e-18
 Identities = 34/55 (61%), Positives = 44/55 (80%)
 Frame = +3

Query: 150 YTF*NREGRRRALKSLALEFLNAKIQDGAHCPVDDARAAMLLYQKHKKAWERSLK 314
           Y F  +EG +RAL+ LA EFL  +IQ+G HCPV+DAR+AMLLYQK +K WE+S+K
Sbjct: 186 YQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240



 Score = 40.0 bits (92), Expect(2) = 5e-18
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +1

Query: 1   KALLLSHPRNHIRDTSEYQPFLK 69
           KALLLSHP+N +RDTSEYQ F K
Sbjct: 169 KALLLSHPKNDVRDTSEYQFFQK 191


>ref|XP_003539610.1| PREDICTED: RNA exonuclease 4-like [Glycine max]
          Length = 266

 Score = 71.6 bits (174), Expect(2) = 6e-18
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = +3

Query: 141 SNMYTF*NREGRRRALKSLALEFLNAKIQDGAHCPVDDARAAMLLYQKHKKAWERSLK 314
           S    F NR   RRAL+ LA + L   IQ G HCP++DARAAMLLYQ++KK WE+S+K
Sbjct: 178 SEYQPFLNRSSSRRALRHLAAKHLGVNIQTGEHCPIEDARAAMLLYQRNKKEWEKSIK 235



 Score = 43.9 bits (102), Expect(2) = 6e-18
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +1

Query: 1   KALLLSHPRNHIRDTSEYQPFL 66
           KALLLSHPR  IRDTSEYQPFL
Sbjct: 163 KALLLSHPRKDIRDTSEYQPFL 184


>ref|XP_002518369.1| RNA exonuclease, putative [Ricinus communis]
           gi|223542464|gb|EEF44005.1| RNA exonuclease, putative
           [Ricinus communis]
          Length = 299

 Score = 75.5 bits (184), Expect(2) = 2e-17
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = +3

Query: 165 REGRRRALKSLALEFLNAKIQDGAHCPVDDARAAMLLYQKHKKAWERSLK 314
           +E RRRAL+ LA EFL  KIQDG HC ++DARA MLLYQK+KK WE+S+K
Sbjct: 217 KERRRRALRHLAAEFLGVKIQDGEHCSIEDARATMLLYQKNKKEWEKSVK 266



 Score = 38.1 bits (87), Expect(2) = 2e-17
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +1

Query: 1   KALLLSHPRNHIRDTSEYQPFLK 69
           K LLL HP+  +RDT EYQPFLK
Sbjct: 195 KVLLLCHPKKDLRDTVEYQPFLK 217