BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030736
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              70   1e-10
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    68   9e-10
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    66   3e-09
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    65   7e-09
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    65   7e-09

>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/84 (44%), Positives = 49/84 (58%)
 Frame = -1

Query: 257 DGTGVEERSAIGDTVVEHFKNLFTYSNPQTHVRDLNILDTVITDEQNNNLTREVTLEEVK 78
           +G    E   +    V +F+ LF  SNPQ     L+ + T+ITD+ N+ LT   T +EV+
Sbjct: 225 NGKWFAEDKDVQHIAVSYFETLFNKSNPQNIAESLSEVKTLITDQINDFLTTPATEDEVR 284

Query: 77  EALFSMDHHKAPGPDGFTPLFYQK 6
            ALF M   KAPGPDG T LF+QK
Sbjct: 285 AALFLMHPEKAPGPDGMTALFFQK 308


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/78 (46%), Positives = 47/78 (60%)
 Frame = -1

Query: 239 ERSAIGDTVVEHFKNLFTYSNPQTHVRDLNILDTVITDEQNNNLTREVTLEEVKEALFSM 60
           E   I +  V +F+NLFT +NPQ     L  +  +ITD  N+ LT + T  EV+ ALF +
Sbjct: 165 EDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMI 224

Query: 59  DHHKAPGPDGFTPLFYQK 6
              KAPGPDG T LF+QK
Sbjct: 225 HPEKAPGPDGMTALFFQK 242


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/74 (45%), Positives = 45/74 (60%)
 Frame = -1

Query: 224 GDTVVEHFKNLFTYSNPQTHVRDLNILDTVITDEQNNNLTREVTLEEVKEALFSMDHHKA 45
           G      F+NLFT +   TH   L  L   +T E N+NL +EVT  EV  A+FS++   A
Sbjct: 385 GKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQEVTELEVYNAVFSINKESA 444

Query: 44  PGPDGFTPLFYQKY 3
           PGPDGFT LF+Q++
Sbjct: 445 PGPDGFTALFFQQH 458


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/87 (39%), Positives = 50/87 (57%)
 Frame = -1

Query: 269 IRKADGTGVEERSAIGDTVVEHFKNLFTYSNPQTHVRDLNILDTVITDEQNNNLTREVTL 90
           +R+ DG+ VE        ++E FK LFT +  Q   + L+++D  ++   N +L  E T 
Sbjct: 627 LRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTR 686

Query: 89  EEVKEALFSMDHHKAPGPDGFTPLFYQ 9
           EEVKEAL ++   KAPGPDG    FY+
Sbjct: 687 EEVKEALDAIGDLKAPGPDGMPAGFYK 713


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/88 (36%), Positives = 49/88 (55%)
 Frame = -1

Query: 269 IRKADGTGVEERSAIGDTVVEHFKNLFTYSNPQTHVRDLNILDTVITDEQNNNLTREVTL 90
           +R++DG    +   +G+     F++L+T          LN+ +  ITDE N  LT+  T 
Sbjct: 623 LRRSDGMMCSKEEELGEIARSFFRDLYTKDESLNPGELLNMFEPKITDEMNGMLTKPFTD 682

Query: 89  EEVKEALFSMDHHKAPGPDGFTPLFYQK 6
           EE+ +ALF +   KAPGPDGF   F+Q+
Sbjct: 683 EEISDALFQIGPLKAPGPDGFPARFFQR 710