BLASTX nr result

ID: Coptis24_contig00030735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030735
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280209.1| PREDICTED: uncharacterized protein LOC100242...   249   4e-64
ref|NP_001235186.1| uncharacterized protein LOC100527887 [Glycin...   244   8e-63
ref|NP_001240904.1| uncharacterized protein LOC100800384 [Glycin...   241   1e-61
gb|ABK93343.1| unknown [Populus trichocarpa]                          237   2e-60
ref|XP_002299430.1| predicted protein [Populus trichocarpa] gi|2...   235   6e-60

>ref|XP_002280209.1| PREDICTED: uncharacterized protein LOC100242761 [Vitis vinifera]
           gi|297742435|emb|CBI34584.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score =  249 bits (635), Expect = 4e-64
 Identities = 115/150 (76%), Positives = 136/150 (90%)
 Frame = -2

Query: 623 ASIQSRGNEREGAEIVYGSEACYRSSIMLLAELGFPKGVLPLQDLEECGRVRETGFIWMK 444
           ++I+S+ ++R GAEIVYGSEAC+  SI LL ELGFPKGVLPLQDL ECGRVRETGF+WMK
Sbjct: 3   STIRSQEDQRAGAEIVYGSEACFNHSISLLEELGFPKGVLPLQDLVECGRVRETGFVWMK 62

Query: 443 QKTPFEHFFLATNTRVSYAIEVTAYIEKFKMKKMTGVKSKQMMLWVPITEMSIDDPSGKK 264
           QK P+EHFF  TNTRVSY++EVTAY+EKFKMKKMTG+KSKQ+ LWVPITEMSIDDP+ +K
Sbjct: 63  QKAPYEHFFTGTNTRVSYSMEVTAYVEKFKMKKMTGIKSKQVFLWVPITEMSIDDPASQK 122

Query: 263 IYFKTPLGIGRSFPVTAFMTEEEKHKYLEE 174
           I+FKTP+GIG++FP+ AFMTEEEK KYLEE
Sbjct: 123 IHFKTPVGIGKAFPLVAFMTEEEKQKYLEE 152


>ref|NP_001235186.1| uncharacterized protein LOC100527887 [Glycine max]
           gi|255633464|gb|ACU17090.1| unknown [Glycine max]
          Length = 157

 Score =  244 bits (624), Expect = 8e-63
 Identities = 116/149 (77%), Positives = 130/149 (87%)
 Frame = -2

Query: 626 MASIQSRGNEREGAEIVYGSEACYRSSIMLLAELGFPKGVLPLQDLEECGRVRETGFIWM 447
           MAS+   G ER GAEIVYGSE CYR SI LL ELGFPKGVLPLQDL ECGRVRETGF+WM
Sbjct: 1   MASV---GKERAGAEIVYGSEECYRQSIELLEELGFPKGVLPLQDLVECGRVRETGFVWM 57

Query: 446 KQKTPFEHFFLATNTRVSYAIEVTAYIEKFKMKKMTGVKSKQMMLWVPITEMSIDDPSGK 267
           KQK P+EHFF  TNTRVSYA+EVT Y+EKF+MKKMTG+KSKQMMLWVPI EMSI+DP G+
Sbjct: 58  KQKAPYEHFFEGTNTRVSYAVEVTGYVEKFRMKKMTGIKSKQMMLWVPIAEMSIEDPKGQ 117

Query: 266 KIYFKTPLGIGRSFPVTAFMTEEEKHKYL 180
           KI+FKTP+GIG+SFP+ AFMT EEK K+L
Sbjct: 118 KIHFKTPMGIGKSFPIMAFMTPEEKEKHL 146


>ref|NP_001240904.1| uncharacterized protein LOC100800384 [Glycine max]
           gi|255637927|gb|ACU19280.1| unknown [Glycine max]
          Length = 157

 Score =  241 bits (614), Expect = 1e-61
 Identities = 112/140 (80%), Positives = 125/140 (89%)
 Frame = -2

Query: 599 EREGAEIVYGSEACYRSSIMLLAELGFPKGVLPLQDLEECGRVRETGFIWMKQKTPFEHF 420
           ER GAEIVYGSE CYR SI LL ELGFPKGVLPLQDL ECGRVRETGF+WMKQK P+EHF
Sbjct: 7   ERSGAEIVYGSEECYRHSIELLEELGFPKGVLPLQDLVECGRVRETGFVWMKQKAPYEHF 66

Query: 419 FLATNTRVSYAIEVTAYIEKFKMKKMTGVKSKQMMLWVPITEMSIDDPSGKKIYFKTPLG 240
           F  TNTRVSYA+EVT Y+EKF+MKKM+G+KSKQMMLWVPITEMSI+DP G+KI FKTP+G
Sbjct: 67  FEGTNTRVSYAVEVTGYVEKFRMKKMSGIKSKQMMLWVPITEMSIEDPKGQKILFKTPMG 126

Query: 239 IGRSFPVTAFMTEEEKHKYL 180
           IG+SFP+ AFMT EEK K+L
Sbjct: 127 IGKSFPILAFMTPEEKEKHL 146


>gb|ABK93343.1| unknown [Populus trichocarpa]
          Length = 158

 Score =  237 bits (604), Expect = 2e-60
 Identities = 109/150 (72%), Positives = 134/150 (89%)
 Frame = -2

Query: 617 IQSRGNEREGAEIVYGSEACYRSSIMLLAELGFPKGVLPLQDLEECGRVRETGFIWMKQK 438
           I+S+ +ER GAEIVYG E C+R SI LL ELGFPKGVLPL+DLEECGRV+ETGF+WMKQK
Sbjct: 5   IRSKEDERAGAEIVYGHEECHRHSIELLEELGFPKGVLPLKDLEECGRVKETGFVWMKQK 64

Query: 437 TPFEHFFLATNTRVSYAIEVTAYIEKFKMKKMTGVKSKQMMLWVPITEMSIDDPSGKKIY 258
            P+EHFF+ +NT+VSYA EVTAY+EKFKMKKMTG+KSKQM LWVP++EMSI++PS KKI 
Sbjct: 65  APYEHFFVGSNTKVSYATEVTAYVEKFKMKKMTGIKSKQMFLWVPLSEMSIENPSRKKIL 124

Query: 257 FKTPLGIGRSFPVTAFMTEEEKHKYLEEMQ 168
           FKTP+GIG+SFPV+AFMT+EEK +  E+++
Sbjct: 125 FKTPMGIGKSFPVSAFMTDEEKQEQQEKLE 154


>ref|XP_002299430.1| predicted protein [Populus trichocarpa] gi|222846688|gb|EEE84235.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  235 bits (599), Expect = 6e-60
 Identities = 113/153 (73%), Positives = 133/153 (86%), Gaps = 1/153 (0%)
 Frame = -2

Query: 626 MAS-IQSRGNEREGAEIVYGSEACYRSSIMLLAELGFPKGVLPLQDLEECGRVRETGFIW 450
           MAS I+S+ +ER GAEIVYG E C+R SI LL ELGFPKGVLPL+DLEECGRV+ETGF+W
Sbjct: 1   MASMIRSKEDERAGAEIVYGPEECHRHSIELLEELGFPKGVLPLKDLEECGRVKETGFVW 60

Query: 449 MKQKTPFEHFFLATNTRVSYAIEVTAYIEKFKMKKMTGVKSKQMMLWVPITEMSIDDPSG 270
           MKQK P EHFF+ +N++VSYA EVT Y+EKFKMKKMTG+KSKQM LWVPI+EMSI DPS 
Sbjct: 61  MKQKAPCEHFFVGSNSKVSYATEVTGYVEKFKMKKMTGIKSKQMFLWVPISEMSIGDPSS 120

Query: 269 KKIYFKTPLGIGRSFPVTAFMTEEEKHKYLEEM 171
           KKI FKTP+GIG+SFP +AFMT+EEK + LEE+
Sbjct: 121 KKILFKTPMGIGKSFPFSAFMTDEEKQEKLEEV 153


Top