BLASTX nr result

ID: Coptis24_contig00030725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030725
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590553.1| hypothetical protein MTR_1g071070 [Medicago ...    87   1e-15
ref|XP_002520967.1| hypothetical protein RCOM_0991200 [Ricinus c...    82   4e-14
ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_002306805.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_004163564.1| PREDICTED: uncharacterized protein LOC101224...    80   2e-13

>ref|XP_003590553.1| hypothetical protein MTR_1g071070 [Medicago truncatula]
           gi|355479601|gb|AES60804.1| hypothetical protein
           MTR_1g071070 [Medicago truncatula]
          Length = 722

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 63/164 (38%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
 Frame = +3

Query: 12  VSPRLYSNPVSPDRSNESNAAKSPCSPARRKAVVISVEQRR----SSARISSRKNESDQM 179
           +SPR         R++       P    RR+     V+ RR    +S +ISSR+N + Q 
Sbjct: 364 LSPRFDDRAQVNSRNSSPTRRNVPNVETRRRLSNEGVDSRRVSPVNSPKISSRRNATAQT 423

Query: 180 SKSPRNNRRSVVEISSK------DKFSCYTEDEXXXXXXXXXXXXX---QRSEGKNLLTR 332
           +       R V++   K      D++S  +E+                 +  EG+NLL R
Sbjct: 424 ATGGSPRMRKVIDPKVKMLGVAEDEWSTVSENSFTTSNSLTDTEKYKLEEYKEGRNLLDR 483

Query: 333 CDKLLNSIAEITTTTESQPSPVSVLDSSFYRDEFC---PI-KRC 452
           CDKLLNSIAEIT   E QPSPVSVLDSSFY+DE+C   PI KRC
Sbjct: 484 CDKLLNSIAEITAANELQPSPVSVLDSSFYKDEWCSPSPITKRC 527


>ref|XP_002520967.1| hypothetical protein RCOM_0991200 [Ricinus communis]
           gi|223539804|gb|EEF41384.1| hypothetical protein
           RCOM_0991200 [Ricinus communis]
          Length = 773

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 13/149 (8%)
 Frame = +3

Query: 33  NPVSPDRSNESNAAKSPCSPARRKAVVISVEQRRS------------SARISSRKNESDQ 176
           N +SP RS ES++ KSP    RR+ + +  ++R S            S +I+SRK   D 
Sbjct: 426 NSISPTRS-ESSSVKSP---HRRRPLSVETQRRVSNNNNNSRASPVQSPKINSRKTIPD- 480

Query: 177 MSKSPRNNRRSVVEISSKDKFSCYTED-EXXXXXXXXXXXXXQRSEGKNLLTRCDKLLNS 353
             +SP+N +++V+ ++  +  S  ++                   +G+NLLTRCDKLL+S
Sbjct: 481 --RSPKNRKQTVLVVAEDESSSSVSDSISTSSHTDTERSKMEDYKDGRNLLTRCDKLLHS 538

Query: 354 IAEITTTTESQPSPVSVLDSSFYRDEFCP 440
           IAE+ T TE QPSPVSVLDS FY++E  P
Sbjct: 539 IAEM-TATELQPSPVSVLDSLFYKEESSP 566


>ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|222843808|gb|EEE81355.1|
           predicted protein [Populus trichocarpa]
          Length = 789

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 66/161 (40%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
 Frame = +3

Query: 6   GAVSPRLYSNPVSPDRSNESNAAKSPCSPARRKAVVI-SVEQRR----SSARISSRKNES 170
           G V  R  S+P+     NES++ + P S   +K V   SVEQRR     S +I SRK   
Sbjct: 427 GQVRGRNLSSPMG----NESSSRRRPLSVETQKRVSNDSVEQRRVSPVQSPKIISRKTGL 482

Query: 171 DQMSKSPRNNRRSVVEISSKDKFSCYTEDEXXXXXXXXXXXXXQRS-----------EGK 317
           DQ +      R+  VEI  KD  S    D+               +           EG+
Sbjct: 483 DQTTTRALR-RKPTVEIYHKDDKSFVLADDDLSAFSESSVSTSSHADMERSKLEDYNEGR 541

Query: 318 NLLTRCDKLLNSIAEITTTTESQPSPVSVLDSSFYRDEFCP 440
           NLL RCDKLL+SIAEI T +E QPSPVSVLDSSFY++E  P
Sbjct: 542 NLLERCDKLLHSIAEI-TASELQPSPVSVLDSSFYKEESSP 581


>ref|XP_002306805.1| predicted protein [Populus trichocarpa] gi|222856254|gb|EEE93801.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 60/145 (41%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
 Frame = +3

Query: 30  SNPVSPDRSNESNAAKSPCS-PARRKAVVISVEQRRSSARISSRKNESDQMSKSPRNNRR 206
           S+P++ +    S   + P S   +R+    S+EQRR S  + S K  S   ++SPR  R+
Sbjct: 299 SSPMANENGGRSPNRRRPMSVETQRRVSNDSLEQRRESP-VQSPKISSKTTNRSPR--RK 355

Query: 207 SVVEISSKDKFSCYTEDEXXXXXXXXXXXXXQRSEGKNLLTRCDKLLNSIAEITTTTESQ 386
             VEI  KD                        +EG+NLL RCDKLL+SIAEI T  E Q
Sbjct: 356 PTVEIYHKDD--------------------KDYNEGRNLLERCDKLLHSIAEI-TANELQ 394

Query: 387 PSPVSVLDSSFYRDEFCP---IKRC 452
           PSPVSVLDSSFY++E  P   +KRC
Sbjct: 395 PSPVSVLDSSFYKEESSPSPVMKRC 419


>ref|XP_004163564.1| PREDICTED: uncharacterized protein LOC101224478 [Cucumis sativus]
          Length = 771

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 62/154 (40%), Positives = 81/154 (52%), Gaps = 21/154 (13%)
 Frame = +3

Query: 42  SPDRSNESNAAKSPCSPARRKAVVIS-------VEQRRSSARISSRKNESDQMS-KSPRN 197
           SP RS ESN      SP+RR   V +       V+QRRSS   SS+     QMS +SP+N
Sbjct: 409 SPTRS-ESNVK----SPSRRGLFVETQRRINDPVDQRRSSKINSSKFGSDPQMSNRSPKN 463

Query: 198 NR----------RSVVEISSKDKFSCYTEDEXXXXXXXXXXXXX---QRSEGKNLLTRCD 338
            +          R +    ++D+ S ++E                  +  EG+ LL RC 
Sbjct: 464 RKPMGSVHHPKERKIYISQAEDESSTFSESSISNSSQTDTERSNKIEEYKEGRTLLERCG 523

Query: 339 KLLNSIAEITTTTESQPSPVSVLDSSFYRDEFCP 440
           KLL+SIAEIT +TE QPSPVSVLDSSFY++E  P
Sbjct: 524 KLLHSIAEITASTELQPSPVSVLDSSFYKEESSP 557


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