BLASTX nr result

ID: Coptis24_contig00030724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030724
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880604.1| transcriptional factor B3 family protein [Ar...    67   2e-09
ref|XP_002880626.1| hypothetical protein ARALYDRAFT_901062 [Arab...    65   6e-09
ref|XP_002878782.1| hypothetical protein ARALYDRAFT_901047 [Arab...    64   1e-08
ref|XP_002867289.1| hypothetical protein ARALYDRAFT_353664 [Arab...    64   1e-08
ref|XP_002880815.1| hypothetical protein ARALYDRAFT_901447 [Arab...    62   5e-08

>ref|XP_002880604.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297326443|gb|EFH56863.1| transcriptional
            factor B3 family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1609

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = +1

Query: 19   LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
            L +PR F RENGL  +C  + L N    SW ++LK   S  ++ I  GW  F  AN L+ 
Sbjct: 1373 LYLPRRFMRENGLDKRCGKMILMNEKGKSWTLDLKQKKSCGTSLIKRGWSSFCRANGLRA 1432

Query: 199  GDLCTFELVSRGSNKIV 249
            G + TF+L+ +G N ++
Sbjct: 1433 GSIITFKLIKKGGNLVL 1449



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/82 (37%), Positives = 46/82 (56%)
 Frame = +1

Query: 4    FKSYHLIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEA 183
            + S HL  PR F RENG+      I L N    SW++ L+  PS  + ++  GW  F +A
Sbjct: 1262 YDSMHL--PRPFVRENGVVTGSGEIVLMNEKGRSWKLKLRQKPSCGTVYVKGGWVSFCDA 1319

Query: 184  NKLKVGDLCTFELVSRGSNKIV 249
            N L+ GD+ TF+L+ RG   ++
Sbjct: 1320 NGLRAGDIYTFKLIQRGGTLVL 1341



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/75 (37%), Positives = 40/75 (53%)
 Frame = +1

Query: 25  IPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKVGD 204
           +P  F   NGLT KC  I L +  + SWE++LK+  SS + +I  GW  F + N  K G 
Sbjct: 387 LPPHFTSSNGLTRKCHKIVLRDGGERSWELDLKFNESSDTFYISQGWRNFCDENGQKAGG 446

Query: 205 LCTFELVSRGSNKIV 249
              F+LV  G   ++
Sbjct: 447 FFMFKLVGNGETLVL 461



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/77 (36%), Positives = 41/77 (53%)
 Frame = +1

Query: 19  LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
           L +P  F   NGLT K   I LT+  + SW ++L++  SS + +I  GW  F + N  K 
Sbjct: 145 LYLPLHFTSSNGLTRKNSEIVLTDGGERSWVLDLRFDESSHTFYISRGWRNFCDENGQKA 204

Query: 199 GDLCTFELVSRGSNKIV 249
           GD   F+LV  G   ++
Sbjct: 205 GDFFMFKLVGNGEKLVL 221


>ref|XP_002880626.1| hypothetical protein ARALYDRAFT_901062 [Arabidopsis lyrata subsp.
           lyrata] gi|297326465|gb|EFH56885.1| hypothetical protein
           ARALYDRAFT_901062 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/77 (37%), Positives = 44/77 (57%)
 Frame = +1

Query: 19  LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
           L +PR+F RENGL  +C  I L N    +W ++LK   S  + +I  GW  F  AN L+ 
Sbjct: 269 LNLPRSFVRENGLDKRCVEIVLMNEKGRTWTLDLKGNKSYGTTYIKRGWRSFCHANGLRA 328

Query: 199 GDLCTFELVSRGSNKIV 249
           G + TF+L+ +G   ++
Sbjct: 329 GSIFTFKLIKKGKTPVL 345



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/69 (36%), Positives = 36/69 (52%)
 Frame = +1

Query: 19  LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
           L +P+ F R NGL  +C  + L N    SW ++LK   S  + +I  GW  F   N L+ 
Sbjct: 410 LYLPKRFMRANGLDTRCGEMILMNEKGRSWALDLKRKNSCGTTYIKRGWRSFCRVNGLRA 469

Query: 199 GDLCTFELV 225
           G   TF+L+
Sbjct: 470 GSFYTFKLI 478


>ref|XP_002878782.1| hypothetical protein ARALYDRAFT_901047 [Arabidopsis lyrata subsp.
           lyrata] gi|297324621|gb|EFH55041.1| hypothetical protein
           ARALYDRAFT_901047 [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/77 (37%), Positives = 44/77 (57%)
 Frame = +1

Query: 19  LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
           L +PR+F RENGL  +C  I L N    +W ++LK   S  + +I  GW  F  AN L+ 
Sbjct: 211 LNLPRSFVRENGLDTRCGEIVLMNEKGRTWTLDLKGNKSYRTTYIKQGWRSFCHANGLRA 270

Query: 199 GDLCTFELVSRGSNKIV 249
           G + TF+L+ +G   ++
Sbjct: 271 GSIFTFKLIQKGKTPVL 287



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = +1

Query: 19  LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
           L +P+ F RENGL  +C  + L N    SW ++LK   S  + +I  GW  F  AN L+ 
Sbjct: 356 LYLPKRFMRENGLDTRCGEMILMNEKGRSWALDLKRKNSCGTTYIKRGWRSFCRANGLRA 415

Query: 199 GDLCTFELV 225
           G   TF+L+
Sbjct: 416 GSFYTFKLI 424


>ref|XP_002867289.1| hypothetical protein ARALYDRAFT_353664 [Arabidopsis lyrata subsp.
           lyrata] gi|297313125|gb|EFH43548.1| hypothetical protein
           ARALYDRAFT_353664 [Arabidopsis lyrata subsp. lyrata]
          Length = 912

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = +1

Query: 19  LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
           L + + F R NGL  +CC I L N +  SW V L+Y  ++  A I  GW  F  AN L+ 
Sbjct: 593 LSLIKGFARSNGLNQRCCEIDLMNQHGKSWTVGLRYSTANEQASISGGWRDFCLANGLEA 652

Query: 199 GDLCTFELVSRGSNKIV 249
           G    F+LV  G+  ++
Sbjct: 653 GSFYRFKLVQNGARPLL 669


>ref|XP_002880815.1| hypothetical protein ARALYDRAFT_901447 [Arabidopsis lyrata subsp.
           lyrata] gi|297326654|gb|EFH57074.1| hypothetical protein
           ARALYDRAFT_901447 [Arabidopsis lyrata subsp. lyrata]
          Length = 535

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/72 (41%), Positives = 39/72 (54%)
 Frame = +1

Query: 19  LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
           L +P  F R NGL N+C  + L N    SW V LK   S ++ +I  GW  F  AN L+ 
Sbjct: 144 LNLPMCFVRANGLDNRCGEMILINEKGRSWTVALKRKKSCATTYIRRGWRNFCNANGLRA 203

Query: 199 GDLCTFELVSRG 234
           G   TF+L+ RG
Sbjct: 204 GSFFTFKLIERG 215


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