BLASTX nr result
ID: Coptis24_contig00030724
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00030724
(321 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002880604.1| transcriptional factor B3 family protein [Ar... 67 2e-09
ref|XP_002880626.1| hypothetical protein ARALYDRAFT_901062 [Arab... 65 6e-09
ref|XP_002878782.1| hypothetical protein ARALYDRAFT_901047 [Arab... 64 1e-08
ref|XP_002867289.1| hypothetical protein ARALYDRAFT_353664 [Arab... 64 1e-08
ref|XP_002880815.1| hypothetical protein ARALYDRAFT_901447 [Arab... 62 5e-08
>ref|XP_002880604.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297326443|gb|EFH56863.1| transcriptional
factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1609
Score = 66.6 bits (161), Expect = 2e-09
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +1
Query: 19 LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
L +PR F RENGL +C + L N SW ++LK S ++ I GW F AN L+
Sbjct: 1373 LYLPRRFMRENGLDKRCGKMILMNEKGKSWTLDLKQKKSCGTSLIKRGWSSFCRANGLRA 1432
Query: 199 GDLCTFELVSRGSNKIV 249
G + TF+L+ +G N ++
Sbjct: 1433 GSIITFKLIKKGGNLVL 1449
Score = 65.5 bits (158), Expect = 4e-09
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +1
Query: 4 FKSYHLIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEA 183
+ S HL PR F RENG+ I L N SW++ L+ PS + ++ GW F +A
Sbjct: 1262 YDSMHL--PRPFVRENGVVTGSGEIVLMNEKGRSWKLKLRQKPSCGTVYVKGGWVSFCDA 1319
Query: 184 NKLKVGDLCTFELVSRGSNKIV 249
N L+ GD+ TF+L+ RG ++
Sbjct: 1320 NGLRAGDIYTFKLIQRGGTLVL 1341
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +1
Query: 25 IPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKVGD 204
+P F NGLT KC I L + + SWE++LK+ SS + +I GW F + N K G
Sbjct: 387 LPPHFTSSNGLTRKCHKIVLRDGGERSWELDLKFNESSDTFYISQGWRNFCDENGQKAGG 446
Query: 205 LCTFELVSRGSNKIV 249
F+LV G ++
Sbjct: 447 FFMFKLVGNGETLVL 461
Score = 58.2 bits (139), Expect = 7e-07
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +1
Query: 19 LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
L +P F NGLT K I LT+ + SW ++L++ SS + +I GW F + N K
Sbjct: 145 LYLPLHFTSSNGLTRKNSEIVLTDGGERSWVLDLRFDESSHTFYISRGWRNFCDENGQKA 204
Query: 199 GDLCTFELVSRGSNKIV 249
GD F+LV G ++
Sbjct: 205 GDFFMFKLVGNGEKLVL 221
>ref|XP_002880626.1| hypothetical protein ARALYDRAFT_901062 [Arabidopsis lyrata subsp.
lyrata] gi|297326465|gb|EFH56885.1| hypothetical protein
ARALYDRAFT_901062 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 65.1 bits (157), Expect = 6e-09
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +1
Query: 19 LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
L +PR+F RENGL +C I L N +W ++LK S + +I GW F AN L+
Sbjct: 269 LNLPRSFVRENGLDKRCVEIVLMNEKGRTWTLDLKGNKSYGTTYIKRGWRSFCHANGLRA 328
Query: 199 GDLCTFELVSRGSNKIV 249
G + TF+L+ +G ++
Sbjct: 329 GSIFTFKLIKKGKTPVL 345
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 19 LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
L +P+ F R NGL +C + L N SW ++LK S + +I GW F N L+
Sbjct: 410 LYLPKRFMRANGLDTRCGEMILMNEKGRSWALDLKRKNSCGTTYIKRGWRSFCRVNGLRA 469
Query: 199 GDLCTFELV 225
G TF+L+
Sbjct: 470 GSFYTFKLI 478
>ref|XP_002878782.1| hypothetical protein ARALYDRAFT_901047 [Arabidopsis lyrata subsp.
lyrata] gi|297324621|gb|EFH55041.1| hypothetical protein
ARALYDRAFT_901047 [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 64.3 bits (155), Expect = 1e-08
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +1
Query: 19 LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
L +PR+F RENGL +C I L N +W ++LK S + +I GW F AN L+
Sbjct: 211 LNLPRSFVRENGLDTRCGEIVLMNEKGRTWTLDLKGNKSYRTTYIKQGWRSFCHANGLRA 270
Query: 199 GDLCTFELVSRGSNKIV 249
G + TF+L+ +G ++
Sbjct: 271 GSIFTFKLIQKGKTPVL 287
Score = 58.5 bits (140), Expect = 5e-07
Identities = 27/69 (39%), Positives = 38/69 (55%)
Frame = +1
Query: 19 LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
L +P+ F RENGL +C + L N SW ++LK S + +I GW F AN L+
Sbjct: 356 LYLPKRFMRENGLDTRCGEMILMNEKGRSWALDLKRKNSCGTTYIKRGWRSFCRANGLRA 415
Query: 199 GDLCTFELV 225
G TF+L+
Sbjct: 416 GSFYTFKLI 424
>ref|XP_002867289.1| hypothetical protein ARALYDRAFT_353664 [Arabidopsis lyrata subsp.
lyrata] gi|297313125|gb|EFH43548.1| hypothetical protein
ARALYDRAFT_353664 [Arabidopsis lyrata subsp. lyrata]
Length = 912
Score = 63.9 bits (154), Expect = 1e-08
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +1
Query: 19 LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
L + + F R NGL +CC I L N + SW V L+Y ++ A I GW F AN L+
Sbjct: 593 LSLIKGFARSNGLNQRCCEIDLMNQHGKSWTVGLRYSTANEQASISGGWRDFCLANGLEA 652
Query: 199 GDLCTFELVSRGSNKIV 249
G F+LV G+ ++
Sbjct: 653 GSFYRFKLVQNGARPLL 669
>ref|XP_002880815.1| hypothetical protein ARALYDRAFT_901447 [Arabidopsis lyrata subsp.
lyrata] gi|297326654|gb|EFH57074.1| hypothetical protein
ARALYDRAFT_901447 [Arabidopsis lyrata subsp. lyrata]
Length = 535
Score = 62.0 bits (149), Expect = 5e-08
Identities = 30/72 (41%), Positives = 39/72 (54%)
Frame = +1
Query: 19 LIIPRAFGRENGLTNKCCTITLTNSNKMSWEVNLKYMPSSSSAFIGSGWHQFYEANKLKV 198
L +P F R NGL N+C + L N SW V LK S ++ +I GW F AN L+
Sbjct: 144 LNLPMCFVRANGLDNRCGEMILINEKGRSWTVALKRKKSCATTYIRRGWRNFCNANGLRA 203
Query: 199 GDLCTFELVSRG 234
G TF+L+ RG
Sbjct: 204 GSFFTFKLIERG 215