BLASTX nr result

ID: Coptis24_contig00030719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030719
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271624.2| PREDICTED: cucumisin-like [Vitis vinifera]         56   4e-06
emb|CBI24378.3| unnamed protein product [Vitis vinifera]               56   4e-06
emb|CAN62173.1| hypothetical protein VITISV_027754 [Vitis vinifera]    56   4e-06
ref|XP_004145974.1| PREDICTED: cucumisin-like [Cucumis sativus] ...    55   5e-06

>ref|XP_002271624.2| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 744

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = -3

Query: 176 GQVKGDEALLNYPSMTSYAYVKQPFHKIFPRKVTNVGSATSTYKATISEQPLLNITV 6
           G  +G    LNYPSM S A   +PF+  FPR VTNVG A STY+A I+  PL+ + V
Sbjct: 632 GVTQGAVRDLNYPSMASTADQHKPFNIRFPRTVTNVGQANSTYQAKITADPLMKVQV 688


>emb|CBI24378.3| unnamed protein product [Vitis vinifera]
          Length = 741

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = -3

Query: 176 GQVKGDEALLNYPSMTSYAYVKQPFHKIFPRKVTNVGSATSTYKATISEQPLLNITV 6
           G  +G    LNYPSM S A   +PF+  FPR VTNVG A STY+A I+  PL+ + V
Sbjct: 629 GVTQGAVRDLNYPSMASTADQHKPFNIRFPRTVTNVGQANSTYQAKITADPLMKVQV 685


>emb|CAN62173.1| hypothetical protein VITISV_027754 [Vitis vinifera]
          Length = 683

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = -3

Query: 176 GQVKGDEALLNYPSMTSYAYVKQPFHKIFPRKVTNVGSATSTYKATISEQPLLNITV 6
           G  +G    LNYPSM S A   +PF+  FPR VTNVG A STY+A I+  PL+ + V
Sbjct: 571 GVTQGAVRDLNYPSMASTADQHKPFNIRFPRTVTNVGQANSTYQAKITADPLMKVQV 627


>ref|XP_004145974.1| PREDICTED: cucumisin-like [Cucumis sativus]
           gi|449519026|ref|XP_004166536.1| PREDICTED:
           cucumisin-like [Cucumis sativus]
          Length = 744

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/48 (56%), Positives = 32/48 (66%)
 Frame = -3

Query: 149 LNYPSMTSYAYVKQPFHKIFPRKVTNVGSATSTYKATISEQPLLNITV 6
           LNYPS   + ++  PF +   R+VTNVGS  STYKATIS    LNITV
Sbjct: 640 LNYPSFALFTHISTPFSQTSKRRVTNVGSTNSTYKATISAPSGLNITV 687


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