BLASTX nr result

ID: Coptis24_contig00030713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030713
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCJ47150.1| putative GABA permease, partial [Hordeum vulgare...   196   2e-48
dbj|BAJ92672.1| predicted protein [Hordeum vulgare subsp. vulgar...   196   2e-48
ref|XP_002455926.1| hypothetical protein SORBIDRAFT_03g027370 [S...   193   1e-47
ref|XP_003569326.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   193   1e-47
ref|XP_002279978.1| PREDICTED: uncharacterized amino-acid permea...   192   2e-47

>emb|CCJ47150.1| putative GABA permease, partial [Hordeum vulgare subsp. vulgare]
          Length = 428

 Score =  196 bits (498), Expect = 2e-48
 Identities = 91/118 (77%), Positives = 106/118 (89%)
 Frame = -2

Query: 355 ISFCMALPSLGTLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILL 176
           +S CMALPSLG+LVAFQAMVSIATI + IAY LPIFFRVTLARK F+PGPFNLGRYS+L+
Sbjct: 306 VSLCMALPSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKHFVPGPFNLGRYSVLV 365

Query: 175 GWVAVLWVATITVLFSLPVAYPVTKANLNYTPVVVCGLFIIIVSWWILSARYWFKGPI 2
           GWVAVLWV TITVLFSLPV YPVT+  LNYTPV V GLFI++++ W++SAR+WFKGP+
Sbjct: 366 GWVAVLWVVTITVLFSLPVMYPVTRDTLNYTPVAVGGLFILVLTSWVVSARHWFKGPV 423


>dbj|BAJ92672.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326529285|dbj|BAK01036.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 522

 Score =  196 bits (498), Expect = 2e-48
 Identities = 91/118 (77%), Positives = 105/118 (88%)
 Frame = -2

Query: 355 ISFCMALPSLGTLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILL 176
           +S CMALPSLG+LVAFQAMVSIATI + IAY LPIFFRVTLARK F+PGPFNLGRY +L+
Sbjct: 400 VSLCMALPSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKHFVPGPFNLGRYGVLV 459

Query: 175 GWVAVLWVATITVLFSLPVAYPVTKANLNYTPVVVCGLFIIIVSWWILSARYWFKGPI 2
           GWVAVLWV TITVLFSLPV YPVTK  LNYTPV V GLFI++++ W++SAR+WFKGP+
Sbjct: 460 GWVAVLWVVTITVLFSLPVTYPVTKDTLNYTPVAVGGLFILVLTSWVVSARHWFKGPV 517


>ref|XP_002455926.1| hypothetical protein SORBIDRAFT_03g027370 [Sorghum bicolor]
           gi|241927901|gb|EES01046.1| hypothetical protein
           SORBIDRAFT_03g027370 [Sorghum bicolor]
          Length = 534

 Score =  193 bits (491), Expect = 1e-47
 Identities = 90/118 (76%), Positives = 104/118 (88%)
 Frame = -2

Query: 355 ISFCMALPSLGTLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILL 176
           I+ CMALPSLG+LVAFQAMVSIATI + I+Y LPI FRVTLARK F+PGPFNLGRY +L+
Sbjct: 412 IALCMALPSLGSLVAFQAMVSIATIGLYISYALPILFRVTLARKYFVPGPFNLGRYGVLV 471

Query: 175 GWVAVLWVATITVLFSLPVAYPVTKANLNYTPVVVCGLFIIIVSWWILSARYWFKGPI 2
           GWVAVLWVATITVLFSLPV YPVTK  LNYTPV V GLF++++  W+LSAR+WFKGP+
Sbjct: 472 GWVAVLWVATITVLFSLPVTYPVTKDTLNYTPVAVGGLFVLVLGSWVLSARHWFKGPV 529


>ref|XP_003569326.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized amino-acid permease
           C15C4.04c-like [Brachypodium distachyon]
          Length = 614

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/118 (76%), Positives = 104/118 (88%)
 Frame = -2

Query: 355 ISFCMALPSLGTLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILL 176
           IS CMALPSLG+LVAFQAMVSIATI + IAY LPIFFRVTLARK F+PGPFNLGRY + +
Sbjct: 492 ISLCMALPSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKYFVPGPFNLGRYGVAV 551

Query: 175 GWVAVLWVATITVLFSLPVAYPVTKANLNYTPVVVCGLFIIIVSWWILSARYWFKGPI 2
           GWVAVLWV TITVLFSLPV YPVTK  LNYTPV V GLFI++++ W++SAR+WF+GP+
Sbjct: 552 GWVAVLWVVTITVLFSLPVTYPVTKDTLNYTPVAVGGLFILVLTSWVVSARHWFRGPV 609


>ref|XP_002279978.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Vitis vinifera]
          Length = 526

 Score =  192 bits (489), Expect = 2e-47
 Identities = 94/118 (79%), Positives = 103/118 (87%)
 Frame = -2

Query: 355 ISFCMALPSLGTLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILL 176
           ISFCMAL SLG+LVAFQAMVSIATI + IAY LPIFFRVTLARKSFIPGPFNLGRY IL+
Sbjct: 404 ISFCMALTSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKSFIPGPFNLGRYGILV 463

Query: 175 GWVAVLWVATITVLFSLPVAYPVTKANLNYTPVVVCGLFIIIVSWWILSARYWFKGPI 2
           GWVAVLWV TI+VLFSLPVAYP+T   LNYTPV V GL  + V+ WI+SAR+WFKGPI
Sbjct: 464 GWVAVLWVITISVLFSLPVAYPITTETLNYTPVAVGGLLFLAVASWIISARHWFKGPI 521


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