BLASTX nr result
ID: Coptis24_contig00030702
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030702 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1... 115 3e-24 ref|XP_002511315.1| thyroid hormone receptor interactor, putativ... 114 1e-23 ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 ho... 109 2e-22 ref|XP_003601182.1| Thyroid receptor-interacting protein [Medica... 105 4e-21 ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 ho... 105 5e-21 >ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1| unknown [Populus trichocarpa] gi|222858748|gb|EEE96295.1| predicted protein [Populus trichocarpa] Length = 465 Score = 115 bits (289), Expect = 3e-24 Identities = 61/99 (61%), Positives = 74/99 (74%), Gaps = 4/99 (4%) Frame = +2 Query: 2 ELIRTGILAE----DRLCLPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGR 169 EL+RTGI++ D L LPNY +LR++LN D QE L KQLLEAAE CEG+SGR Sbjct: 364 ELLRTGIISNFQDSDYLMLPNYSTLREKLNAPDIQEAQPVLPFCKQLLEAAEACEGMSGR 423 Query: 170 TLRKLPFLAHAAMPNPCSCDATKFMHTLIHTARRELSEL 286 +LRKLPFLAHAA+ NP SCDA++F+ +I TARRE SEL Sbjct: 424 SLRKLPFLAHAALSNPNSCDASEFLCAMIDTARREHSEL 462 >ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis] gi|223550430|gb|EEF51917.1| thyroid hormone receptor interactor, putative [Ricinus communis] Length = 460 Score = 114 bits (284), Expect = 1e-23 Identities = 59/99 (59%), Positives = 74/99 (74%), Gaps = 4/99 (4%) Frame = +2 Query: 2 ELIRTGILAE----DRLCLPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGR 169 ELIRTGI++ D L LPNY +L++++N QE T + L KQLLEAAE CEGLSGR Sbjct: 360 ELIRTGIISNFQDPDNLVLPNYPTLKEKMNGSAAQEAQTPVKLGKQLLEAAEACEGLSGR 419 Query: 170 TLRKLPFLAHAAMPNPCSCDATKFMHTLIHTARRELSEL 286 +LRKLPFLAHAA+ +P SCD +KF+ T++ ARRE SEL Sbjct: 420 SLRKLPFLAHAALSDPYSCDPSKFLSTMMDAARRERSEL 458 >ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 homolog [Vitis vinifera] gi|297733699|emb|CBI14946.3| unnamed protein product [Vitis vinifera] Length = 455 Score = 109 bits (273), Expect = 2e-22 Identities = 59/101 (58%), Positives = 74/101 (73%), Gaps = 4/101 (3%) Frame = +2 Query: 2 ELIRTGILAE----DRLCLPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGR 169 EL+R GIL DRL L +Y L+++LNV +EP + HL KQLLEAAE CEGLSGR Sbjct: 354 ELVRAGILTNSQECDRLSLLSYTGLKEKLNVAQIEEPGNS-HLCKQLLEAAEACEGLSGR 412 Query: 170 TLRKLPFLAHAAMPNPCSCDATKFMHTLIHTARRELSELVS 292 +LRKLPFLAHAA+ NP SCD +KF+ T+ TA+RE + L+S Sbjct: 413 SLRKLPFLAHAALANPYSCDPSKFLCTMTDTAKRECAGLLS 453 >ref|XP_003601182.1| Thyroid receptor-interacting protein [Medicago truncatula] gi|355490230|gb|AES71433.1| Thyroid receptor-interacting protein [Medicago truncatula] Length = 461 Score = 105 bits (262), Expect = 4e-21 Identities = 55/99 (55%), Positives = 68/99 (68%), Gaps = 4/99 (4%) Frame = +2 Query: 2 ELIRTGILAEDRLC----LPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGR 169 EL+RTGIL C LPNY S +Q +N D E T + L K+L+E AE CEG+SGR Sbjct: 361 ELMRTGILTNFEDCKNIMLPNYASAKQRMNAPDFHEATTFMQLCKKLVETAEACEGMSGR 420 Query: 170 TLRKLPFLAHAAMPNPCSCDATKFMHTLIHTARRELSEL 286 +LRKLPFLAHAA+ NP C+ KF+ T+I TA+RE SEL Sbjct: 421 SLRKLPFLAHAALANPFDCNPIKFLCTMIDTAKRERSEL 459 >ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 homolog [Glycine max] Length = 448 Score = 105 bits (261), Expect = 5e-21 Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 4/99 (4%) Frame = +2 Query: 2 ELIRTGILAEDRLC----LPNYESLRQELNVRDRQEPNTALHLPKQLLEAAEICEGLSGR 169 EL+RTGIL + C PNY S + LN D E T + L KQLLE AE CEG+SGR Sbjct: 348 ELMRTGILTSLQDCKNVMFPNYASAKDRLNTPDFHEDATFMQLCKQLLETAEACEGMSGR 407 Query: 170 TLRKLPFLAHAAMPNPCSCDATKFMHTLIHTARRELSEL 286 +LRKLPFLAHAA+ NP C+ KF+ T+I TA+RE SEL Sbjct: 408 SLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSEL 446